Pairwise Alignments

Query, 183 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) from Escherichia coli BW25113

Subject, 200 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Ralstonia solanacearum PSI07

 Score =  196 bits (497), Expect = 3e-55
 Identities = 96/176 (54%), Positives = 114/176 (64%), Gaps = 2/176 (1%)

Query: 6   GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65
           GW+ G  R PSP+ D RP+     L+V+HNISLPP  FG   +   FT T+D  AHP+F 
Sbjct: 14  GWVAGVHRHPSPNIDARPEGMPIDLIVLHNISLPPARFGTDDVLDFFTNTLDCSAHPYFE 73

Query: 66  EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125
           ++  +RVSAH  IRR GE VQ  P D RAWHAGVS + GR RCNDFSIGIE+EGTD   +
Sbjct: 74  QLRGVRVSAHFFIRRTGECVQLAPCDARAWHAGVSDFFGRTRCNDFSIGIEIEGTDDQPF 133

Query: 126 TDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181
           T AQY   AA+ RA+   YP   + + GH DIAP RKTDPGP FDW   R L   E
Sbjct: 134 TPAQYAVTAALVRAICAAYP--IRAIAGHSDIAPGRKTDPGPCFDWTHLRRLAKLE 187