Pairwise Alignments

Query, 183 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) from Escherichia coli BW25113

Subject, 187 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas sp. S08-1

 Score =  206 bits (525), Expect = 1e-58
 Identities = 101/177 (57%), Positives = 126/177 (71%), Gaps = 2/177 (1%)

Query: 6   GWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFA 65
           GW  GAR  PSP+++ RP  E  +LLV+HNISLPPG+FG   +   F   +    HP+FA
Sbjct: 8   GWCDGARHCPSPNFNERPLGEV-SLLVIHNISLPPGQFGTGKVQQFFQNRLPVDEHPYFA 66

Query: 66  EIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAY 125
            IA L VSAH LI RDG + Q+V   +RAWHAGVS+++ RE CNDFSIGIELEGTD L +
Sbjct: 67  GIAQLTVSAHFLIERDGAVTQFVSCGQRAWHAGVSRFEERENCNDFSIGIELEGTDELPF 126

Query: 126 TDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKE 181
           +DAQYQ LAA+TR L+  YP+++ + + GH DIAP RKTDPGP FDWAR R  +  E
Sbjct: 127 SDAQYQALAALTRELLRAYPELSVERIRGHSDIAPGRKTDPGPFFDWARLRAALQTE 183