Pairwise Alignments

Query, 314 a.a., probable transcriptional activator for leuABCD operon (VIMSS) from Escherichia coli BW25113

Subject, 303 a.a., Transcriptional regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  130 bits (328), Expect = 3e-35
 Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 11/305 (3%)

Query: 18  QLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQ 77
           +LR  DLNLL  FDA+M+E ++TRAA++L +SQ ++S A+A+L+V+F+D L ++ G  + 
Sbjct: 2   RLRDADLNLLVAFDALMRECHVTRAANLLDISQSSMSLALAKLRVLFHDPLLIKSGNALI 61

Query: 78  PTARAFQLFGSVRQALQ----LVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNH 133
           PT RA +L   V Q L+    L+    P   F+PA + +V  +     +D ++   +   
Sbjct: 62  PTVRARELIPQVEQVLRSVDVLIHEHAP---FDPAHASQVITMIAVDYIDFVVMPTLMEA 118

Query: 134 IEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKN 193
           +E+ AP++ +   +   +     +   + +  +SY         + PLF D +V +A   
Sbjct: 119 LEREAPDVSLRLINPNPRRLGEIMSRGDIDLALSYFPTPPENIRTRPLFTDRLVGIARTG 178

Query: 194 HPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYD----TVDKQASIAYQGMAMMSVLSV 249
           HP  + PL         H A+     A+      D     V  Q  +       + V  V
Sbjct: 179 HPMFERPLSLERFCEYGHVAIEPGEGATMYNALVDDALQNVGMQRRVVLSKPTFLGVPFV 238

Query: 250 VSQTHLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLV 309
           ++QT L+A  P  L + F +   +++   PL        L WH+    +  H+W+ E +V
Sbjct: 239 IAQTDLIATLPERLVQRFTDIAPVRIFEPPLPLERLNVVLMWHDRTHNNPLHRWVRELVV 298

Query: 310 SICKR 314
            +  R
Sbjct: 299 KLFAR 303