Pairwise Alignments

Query, 314 a.a., probable transcriptional activator for leuABCD operon (VIMSS) from Escherichia coli BW25113

Subject, 309 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  114 bits (286), Expect = 2e-30
 Identities = 90/308 (29%), Positives = 149/308 (48%), Gaps = 22/308 (7%)

Query: 19  LRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78
           L  VDLNLL VF+A+ Q +N+T A   L  +QP+VSNA++RL+++F+D LF R G G+ P
Sbjct: 3   LSSVDLNLLVVFEALYQTRNVTAAGGRLNRAQPSVSNALSRLRLLFDDPLFTRSGGGMLP 62

Query: 79  TARAFQLFGSVRQALQLVQNEL-PGSGFEPA-SSERVFHLCVCSPLDSILTSQIYNHIEQ 136
           TARA QL   +   L+ +   L P + F+PA +S+R F L      D  L   I + + Q
Sbjct: 63  TARAHQLMLQIHPVLEQIHQTLTPPTRFDPATASQRRFRLAAGDYADITLLPAIISRLRQ 122

Query: 137 IAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPT 196
            AP I +       +N   QL   E +  +             PLF +    +AS++HP 
Sbjct: 123 DAPGIDIRVSRLDRRNVVQQLESGEIDVALGGHIEAVKGMLVQPLFTESFTCIASRHHPR 182

Query: 197 IKGPL--------LKHDVY---NEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGMAMMS 245
           +            L H +Y   ++  A   +DR  +        +  +  +A     +++
Sbjct: 183 LAAESWGLAQYVGLPHALYAPSDDGSARGIIDRRLA-------ELGLERRVAATFSHIVA 235

Query: 246 VLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLP--LKQNSRTCYLSWHEAAGRDKGHQW 303
           + +VV+ + L+A     +A +FA+  +++ LPLP  L  ++ +  L     A RD    W
Sbjct: 236 LPAVVAGSDLIATLAHSVASQFADPTKVRFLPLPAELAVSTFSIDLVAGRQARRDPALTW 295

Query: 304 MEEQLVSI 311
           + + L  +
Sbjct: 296 LCDTLTQL 303