Pairwise Alignments

Query, 314 a.a., probable transcriptional activator for leuABCD operon (VIMSS) from Escherichia coli BW25113

Subject, 298 a.a., LysR family transcriptional regulator from Serratia liquefaciens MT49

 Score =  124 bits (312), Expect = 2e-33
 Identities = 88/297 (29%), Positives = 141/297 (47%), Gaps = 10/297 (3%)

Query: 19  LRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQP 78
           +R +DLNLL   DA++ E N+TRAA  L  SQPAVS  +A+L+ +FND L +   RG++P
Sbjct: 4   IRRLDLNLLVTLDALLSEHNVTRAAQRLNFSQPAVSVHLAKLRDIFNDPLLLPGPRGMRP 63

Query: 79  TARAFQLFGSVRQALQLVQNEL-PGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQI 137
           TAR  +L   +RQAL+ ++  + P + F+P  +E  + +      +S +       +   
Sbjct: 64  TARGDELREPLRQALEALEQAVSPSAPFDPKVAENTWRVAAFDYGESTIVQPALMGLRAA 123

Query: 138 APNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTI 197
           APN  +    ++      Q    E +      +          LF +  VLV    HP +
Sbjct: 124 APNSRLAVIETVPSRIARQAEQGEIDLAFHTREGAPAHLRQRILFSERYVLVGRAGHPGL 183

Query: 198 KGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGMA----MMSVLSVVSQT 253
           + P    +    +H  VS D    F     D V  +A +  + +      + V+SV++ +
Sbjct: 184 QKPPSLAEFCELEHVMVSPDGGGFFGIT--DKVLAEAGLTRRVVLSVPHFLFVMSVLATS 241

Query: 254 HLVAIAPRWLAEEFAESLELQVLPLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVS 310
            LVA+ P  L      +  LQV+  P++       + WHE A RD  HQW+ E +VS
Sbjct: 242 ELVAMLPSRLVR---NNSALQVVEPPVELPGFEMTMLWHERAHRDPAHQWLREHIVS 295