Pairwise Alignments

Query, 551 a.a., DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 566 a.a., Uncharacterized protein YbaE from Escherichia coli ECRC100

 Score =  191 bits (485), Expect = 6e-53
 Identities = 162/578 (28%), Positives = 259/578 (44%), Gaps = 59/578 (10%)

Query: 9   QFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLLNTMQDRGWLTWEAEVGRGKRSRLT 68
           Q+ RLWQ   GK Q  T++ELA    CS RH+RTLL   Q+ GWL W+A+ GRGKR +L 
Sbjct: 9   QYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLLRQAQEAGWLEWQAQSGRGKRGQLR 68

Query: 69  FLYTGLALQQQRAEDLLE---QDRIDQLVQLVGDKATVRQMLVSHLGRSFRQGRHILRVL 125
           FL T  +L+    E  LE   Q  + +L QL      +R +L   +G  ++     LR+ 
Sbjct: 69  FLVTPESLRNAMMEKALETGKQQDVLELAQLA--PGELRTLLQPFMGGQWQNDTPTLRIP 126

Query: 126 YYRPLRNLLPGSALRRSETHIARQIFSSLTRINEENGELEADIAHHWQ-QISPLHWRFFL 184
           YYRPL  L PG    R+E H+A QIFS LTR +        D+AHHW+     L W F+L
Sbjct: 127 YYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDNNTQRPIGDLAHHWETSADGLRWDFYL 186

Query: 185 RPGVHFHHGRELEMDDVIASLKRINTLP----LYSHIADIVSPTPWTLDIHLTQPDRWLP 240
           R  +H+H+G  ++   +   L  +  LP    L+  +  I    P  L   L +PD WL 
Sbjct: 187 RSTLHWHNGDAVKASHLHQRLLMLLQLPALDQLFISVKRIEVTHPQCLTFFLHRPDYWLA 246

Query: 241 LLLGQVPAMILPREWETLSNFASHP----IGTGPYAVIRNSTNQLKIQAFDDFFGYRALI 296
             L             +  +  +HP    IGTGP+ + + +   +++++ D +     L+
Sbjct: 247 HRLA------------SYCSHLAHPQFPLIGTGPFRLTQFTAELVRLESHDYYHLRHPLL 294

Query: 297 DEVNVWVLPEIADEPAG-----GLMLKGPQGEEKEIESRLEEG-----CYYLLFDSRTHR 346
             V  W+ P + ++  G      + +   + EE +  S++  G     CY  L   ++ R
Sbjct: 295 KAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQVSSGISLGFCYLTL--RKSPR 352

Query: 347 GANQQVRDWVSYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHARTIKSEKPAGLESLTL 406
            +  Q R  +S ++  + L+   E   + L   ++ LLP W        ++    ++LTL
Sbjct: 353 LSLWQARKVIS-IIHQSGLLQTLEVG-ENLITASHALLPGWTIPHWQVPDEVKLPKTLTL 410

Query: 407 TFYQDHSEHRVIAGIMQQILASHQVTLKIKEIDYDQW-------HTGEIESDIWLNSA-N 458
            ++     H  +A  +Q  LA+    L I   +   W       H   +  D  +  A  
Sbjct: 411 VYHLPIELH-TMAERLQATLAAEGCELTIIFHNAKNWDDTTLLAHADLMMGDRLIGEAPE 469

Query: 459 FTLPLDF---SVFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQ----QLVASKA 511
           +TL        ++ H+ + P   H   +    DA +    E N  N  +    QL+    
Sbjct: 470 YTLEQWLRCDPLWPHVFDAPAYAH---LQSTLDAVQVMPDEENRFNALKAVFSQLMTDAT 526

Query: 512 MVPLLHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPP 549
           + PL ++   I     + G+R+   GWF+F  AW   P
Sbjct: 527 LTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAP 564