Pairwise Alignments

Query, 553 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 549 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

 Score =  540 bits (1391), Expect = e-158
 Identities = 273/546 (50%), Positives = 375/546 (68%), Gaps = 21/546 (3%)

Query: 6   LTTVVSAAIVGAVLGVSLSTWLGDSGSSTNNNAGPKEPLYWVAPMDPNYRRDKPGKSPMG 65
           LT  ++  ++GA LG ++  WL    S+T  ++  ++PLYWVAPMDPNY+RDKPGKSPMG
Sbjct: 4   LTKTITGVLIGAFLG-AMGVWLL---SNTTTDSNEEKPLYWVAPMDPNYKRDKPGKSPMG 59

Query: 66  MDLVPVYEEAQDSESPGTVSISAAVENNIAVRTDTVKYGTLNNAIKTVGYVQFNQDQLIH 125
           MDL+PVYEE  + +S GT+SI+  V NN+ VRT  VK G +NN ++TVGYVQ+++D+L+H
Sbjct: 60  MDLIPVYEEKGNGKSQGTISINPDVVNNLGVRTVEVKSGDMNNTVQTVGYVQYDEDRLLH 119

Query: 126 IHPRVEGWVEKLFVKASGDPVKKDQPLYELYSPQLVNAQEEYVLALKRNSGELIQAARNR 185
           IHPRVEGW++KL+VKA+G+PV K QP+YELY+P LVNAQEE +LAL+R    LI+AA  R
Sbjct: 120 IHPRVEGWIDKLYVKAAGEPVIKGQPIYELYAPTLVNAQEELLLALRRKDPILIRAANER 179

Query: 186 LRALQLPESFIQQLGKKRQVKQTVTFYSPQDGVIDQLSIREGFYVQPGTTMMSIGTLEQV 245
           L ALQ+P+S I ++ K  QV QT+   +PQ GV+D+L +REG +V+PG ++M+I  L+ +
Sbjct: 180 LAALQVPQSEIGRVRKTGQVSQTIQVSAPQAGVVDKLMVREGMFVKPGESIMAIAQLDHI 239

Query: 246 WVEAEVFERQAELLKIGLPVTMSLDYFNGQSWKGEIDYIYPSLDSTNRTLRVRIRFNNPD 305
           WV  EVFER+A  + +G  V M L+Y  G+ W G +DYIYPSL++  RT +VR+ FNNPD
Sbjct: 240 WVIGEVFEREASFVSVGDVVRMHLNYLPGREWLGRVDYIYPSLNNVTRTAQVRVHFNNPD 299

Query: 306 HKLKPNMFSQIVIHADSDKRQLLVPKEAVIRTQKQDRVVLDLGDGKFKSVEVLLGATGDK 365
             LKP MF+Q+ I A      LL+P+EA+IRT  Q RVVL +  G FKSV V +G   ++
Sbjct: 300 SYLKPGMFAQMRIEAKPMSNVLLIPREALIRTGNQSRVVLAMEGGHFKSVAVKVGHINNE 359

Query: 366 FFEVIEGLEEDDRVVTSAQFLIDSESSKSSDFKRLSQEDEN-------ESIWVEATINSV 418
             E+I GLE  DR+VTSA FLIDSESSK+SDF+R++ E  N       +S+WV A I S+
Sbjct: 360 QAEIISGLEAGDRIVTSAHFLIDSESSKTSDFQRMNHESGNAGATPQPQSVWVAARIESI 419

Query: 419 MAHHNMLNVSHGPVEQWQWPAMTMDLNTQEDLDLSQLKSGMTVHIEISKLSDGSFMITEI 478
           M +H ML + H PV+ WQWPAMTMD +   ++DL  LK  M +H+EI+K  D  +++++I
Sbjct: 420 MDNHRMLVLEHDPVDAWQWPAMTMDFSVAANVDLMGLKPDMRLHVEITKQIDNEYIVSQI 479

Query: 479 HIPD-----QNDKQQDEEVDHSTMDHSTMDHSTMDHSTMDHSTMDHSTMDHSTMDHSTMD 533
           H PD     + DK +D+EV  S      MDHS   H +  +  ++ S   H   +H  MD
Sbjct: 480 HRPDATNKMKMDKAEDQEVHSSGHSDIEMDHS--QHQSSQNEYLEKSHGQHKAKNHEGMD 537

Query: 534 HSTMDH 539
              MDH
Sbjct: 538 ---MDH 540