Pairwise Alignments

Query, 662 a.a., Excinuclease ABC subunit B from Kangiella aquimarina DSM 16071

Subject, 673 a.a., excinuclease ABC subunit B (NCBI) from Escherichia coli BW25113

 Score =  917 bits (2369), Expect = 0.0
 Identities = 457/671 (68%), Positives = 555/671 (82%), Gaps = 10/671 (1%)

Query: 1   MSQQFDIQSPFPPAGDQPKAIKQLLEGLEDGLSHQTLLGVTGSGKTYTMANVIAQSGRPA 60
           MS+ F + S F P+GDQP+AI++L EGLEDGL+HQTLLGVTGSGKT+T+ANVIA   RP 
Sbjct: 1   MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT 60

Query: 61  IIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDSSINEHIE 120
           +++APNKTLAAQLYGEMKEFFP NAVEYFVSYYDYYQPEAYV +SDTFIEKD+S+NEHIE
Sbjct: 61  MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE 120

Query: 121 QMRLSATRALLERRDTIIVASVSAIYGLGDPKAFHSMVMHLKVGDAVDQRFILRRLAELQ 180
           QMRLSAT+A+LERRD ++VASVSAIYGLGDP  +  M++HL VG  +DQR ILRRLAELQ
Sbjct: 121 QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ 180

Query: 181 YTRNEFDLQRATYRVRGDLIDIYPAESEKHAIRIELFDDEVETIQTFDPLTGEVLKRLTR 240
           Y RN+   QR T+RVRG++IDI+PAES+  A+R+ELFD+EVE +  FDPLTG+++  + R
Sbjct: 181 YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR 240

Query: 241 VTVFPKSHYVTSRQTILDAIEQIKVDLKERLAQFYEQNKLVEAQRLEQRVKFDIEMMQEL 300
            T++PK+HYVT R+ I+ A+E+IK +L  R     E NKL+E QRL QR +FD+EMM EL
Sbjct: 241 FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL 300

Query: 301 GYCSGIENYSRYLSGAQPGEPPPCLLDYLPPDALMIIDESHVTVSQIGAMYKGDRSRKET 360
           GYCSGIENYSR+LSG  PGEPPP L DYLP D L+++DESHVT+ QIG MY+GDR+RKET
Sbjct: 301 GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET 360

Query: 361 LVNYGFRLPAALDNRPLRFEEFERISPQTVFVSATPGKYE-EEHSGQVVEQVVRPTGLID 419
           LV YGFRLP+ALDNRPL+FEEFE ++PQT++VSATPG YE E+  G VV+QVVRPTGL+D
Sbjct: 361 LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD 420

Query: 420 PEVEVRPVGTQVDDLLSEIHLRVEKNERVLVTTLTKKMAEDLTDYLSEHGVRVRYLHSDI 479
           P +EVRPV TQVDDLLSEI  R   NERVLVTTLTK+MAEDLT+YL EHG RVRYLHSDI
Sbjct: 421 PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI 480

Query: 480 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 539
           DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
Sbjct: 481 DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG 540

Query: 540 RAARNLSGKAILYADRITGSMERAIGETNRRRAIQQEFNEKHGITPIGVSKKITDVMDTG 599
           RAARN++GKAILY D+IT SM +AIGET RRR  QQ++NE+HGITP G++KK+ D++  G
Sbjct: 541 RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG 600

Query: 600 HS---------KKSRKVAEKLDQYKVKSLADAVKEIAQMEKQMLEYAKNLEFEKAAKLRD 650
            +          KSR + E  +     S     ++I ++E  M+++A+NLEFE+AA++RD
Sbjct: 601 QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD 660

Query: 651 EIEKLRDASLA 661
           ++ +LR+  +A
Sbjct: 661 QLHQLRELFIA 671