Pairwise Alignments

Query, 662 a.a., Excinuclease ABC subunit B from Kangiella aquimarina DSM 16071

Subject, 988 a.a., excinuclease ABC subunit B from Agrobacterium fabrum C58

 Score =  774 bits (1999), Expect = 0.0
 Identities = 403/665 (60%), Positives = 492/665 (73%), Gaps = 11/665 (1%)

Query: 7   IQSPFPPAGDQPKAIKQLLEGLEDGLSHQTLLGVTGSGKTYTMANVIAQSGRPAIIMAPN 66
           + S + PAGDQP AI  L+EG+  G   Q LLGVTGSGKT+TMA VI  + RPA+I+APN
Sbjct: 173 MDSEYQPAGDQPTAIADLVEGINSGERSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPN 232

Query: 67  KTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVAASDTFIEKDSSINEHIEQMRLSA 126
           KTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAYV  SDTFIEK+SSINE I++MR SA
Sbjct: 233 KTLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSA 292

Query: 127 TRALLERRDTIIVASVSAIYGLGDPKAFHSMVMHLKVGDAVDQRFILRRLAELQYTRNEF 186
           TR+LLER D IIVASVS IYG+G  + + +M   ++VGD +DQR +L  L   QY R + 
Sbjct: 293 TRSLLERDDCIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRRDM 352

Query: 187 DLQRATYRVRGDLIDIYPAESEKHAIRIELFDDEVETIQTFDPLTGEVLKRLTRVTVFPK 246
           D QR ++RVRGD I+I+PA  E  A RI +F DE+++I  FDPLTG+    L  V ++  
Sbjct: 353 DFQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLQSVKIYAN 412

Query: 247 SHYVTSRQTILDAIEQIKVDLKERLAQFYEQNKLVEAQRLEQRVKFDIEMMQELGYCSGI 306
           SHYVT R T+  AI+ IK +LK RLA+  +  +L+EAQRLEQR ++DIEM++  G C+GI
Sbjct: 413 SHYVTPRPTLNGAIKSIKEELKVRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCAGI 472

Query: 307 ENYSRYLSGAQPGEPPPCLLDYLPPDALMIIDESHVTVSQIGAMYKGDRSRKETLVNYGF 366
           ENYSRYL+G  PGEPPP L +Y+P +AL+ IDESHV+VSQIG MY+GD  RK TL  YGF
Sbjct: 473 ENYSRYLTGRNPGEPPPTLFEYIPDNALLFIDESHVSVSQIGGMYRGDFRRKATLAEYGF 532

Query: 367 RLPAALDNRPLRFEEFERISPQTVFVSATPGKYEEEHSGQV-VEQVVRPTGLIDPEVEVR 425
           RLP+ +DNRPLRFEE++ + P TV VSATPG +E E SG V  EQV+RPTGLIDP VEVR
Sbjct: 533 RLPSCMDNRPLRFEEWDAMRPLTVAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEVR 592

Query: 426 PVGTQVDDLLSEIHLRVEKNERVLVTTLTKKMAEDLTDYLSEHGVRVRYLHSDIDTVERM 485
              +QVDD+L EI     K  R L T LTK+MAEDLT+YL E GVRVRY+HSDIDT+ER+
Sbjct: 593 SARSQVDDVLGEIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERI 652

Query: 486 EIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNL 545
           EIIRDLRLG FDVLVGINLLREGLD+PE   VAILDADKEGFLRSE SLIQTIGRAARN+
Sbjct: 653 EIIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNV 712

Query: 546 SGKAILYADRITGSMERAIGETNRRRAIQQEFNEKHGITPIGVSKKITDVMDTGHSKKSR 605
            GK ILYAD ITGSM+RA+ ET+RRR  Q  +N +HGITP  V  KI+D++D+ + +   
Sbjct: 713 DGKVILYADNITGSMKRAMEETSRRREKQMAYNAEHGITPESVKAKISDILDSVYERD-- 770

Query: 606 KVAEKLDQYKVKSLADA--------VKEIAQMEKQMLEYAKNLEFEKAAKLRDEIEKLRD 657
            V   +     K  AD            +  +EK M + A +L+FEKAA+LRDEI++L+ 
Sbjct: 771 HVRADISGVSGKGFADGGHLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKA 830

Query: 658 ASLAT 662
           A LAT
Sbjct: 831 AELAT 835