Pairwise Alignments

Query, 295 a.a., tyrosine recombinase XerD from Kangiella aquimarina DSM 16071

Subject, 331 a.a., site-specific tyrosine recombinase XerD from Agrobacterium fabrum C58

 Score =  193 bits (490), Expect = 5e-54
 Identities = 118/310 (38%), Positives = 182/310 (58%), Gaps = 23/310 (7%)

Query: 6   IEQFCDQIWMEQGLSDATLSSYRSDLKLFNQWLQKQGKTLTNSGASDIQQYLAERYSKQY 65
           +E F + +  E+G +  TLSSY  DL    ++L ++G++LT +   D+  YL    ++ +
Sbjct: 14  LESFLEMMSAERGAAANTLSSYEHDLADLREFLGRRGQSLTEAQTPDLSAYLTHLAAQGF 73

Query: 66  SSRSTARFLSSARKFYRYLLQSNHIKVDPTQQIESPKIQPPVPKSLSEDEVDSLLSQPDL 125
           ++ S AR LSS R+FYR+L        DPT  I++P+    +PK++S  +V+ LL     
Sbjct: 74  AATSQARRLSSMRQFYRFLYSEGLRGDDPTGIIDAPRKGLALPKTMSVADVNRLLGLAAQ 133

Query: 126 DTALG-------LRDKAMLELLYSSGLRITELISVEMNQIGFQQGVMRVIGKGNKERIVP 178
           + A         +R   +LELLY++G+R++EL+S+ +  +  +   + + GKGNK+R+V 
Sbjct: 134 EAATEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFLMIRGKGNKDRMVL 193

Query: 179 IGEEALQAIAHYIRYGRAELSKEKV-------------TDWLFLSTRGQ-RMTRQTFWHR 224
           +   A++A+  Y   GR  LS+EK              + WLF S   +  + RQ F   
Sbjct: 194 LSRAAIEAMEKY-EAGRKALSQEKSKAAASQKKTDTAESPWLFPSNSKEGHLPRQVFARD 252

Query: 225 IKFYAKTAGIRKH-LSPHTLRHAFATHLLNHGADLRTLQMLLGHSDLSTTQIYTYVAKER 283
           +K  A  AG+    +SPH LRHAFA+HLL +GADLR +Q LLGHSD+STTQIYT+V +ER
Sbjct: 253 LKDIAIRAGLTASAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQIYTHVLEER 312

Query: 284 LKQLHSQHHP 293
           L++L   HHP
Sbjct: 313 LQELVQTHHP 322