Pairwise Alignments

Query, 465 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Kangiella aquimarina DSM 16071

Subject, 452 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase from Escherichia coli ECOR38

 Score =  366 bits (940), Expect = e-106
 Identities = 211/455 (46%), Positives = 292/455 (64%), Gaps = 15/455 (3%)

Query: 1   MIPLSLKTIAQVTDGQLQGPEKTIEKVVTDSRVDCRDALFVALIGENFDGHKFVGKAKAE 60
           MI ++L  +  + +G+LQG + T++ V TD+R      LFVAL GE FD H F  +AKA 
Sbjct: 1   MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAG 60

Query: 61  GAIALLVEHAVDSDLPQVIVADTSKALGAIAGYVRDQVNPFVIGITGSAGKTTVKEMVAS 120
           GA ALLV   +D DLPQ+IV DT  A G +A +VR QV   V+ +TGS+GKT+VKEM A+
Sbjct: 61  GAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAA 120

Query: 121 ILRQKGNLLATQGNFNNHIGVPLTLLRLKATDQFAVIEMGANHVGEIAYCASIAKPDVSV 180
           IL Q GN L T GN NN IGVP+TLLRL     +AVIE+GANH GEIA+  S+ +P+ ++
Sbjct: 121 ILNQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAAL 180

Query: 181 INNVEAAHIEGFGSIEGVSKAKSEIYEGLSEEGTAVINLDSAFADDWAERFNSLHKVTVS 240
           +NN+ AAH+EGFGS+ GV+KAK EI+ GL E G A++N D+   +DW    + +    V 
Sbjct: 181 VNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADN---NDWLNWQSVIGSRKVW 237

Query: 241 RHK----DANFVADNCQLQANGNVLFEMQHTQDGSSQTISVQLPVPGMHNVSNALVAAAL 296
           R      +++F A N  + ++G      + T    + ++ V LP+PG HN++NAL AAAL
Sbjct: 238 RFSPNAANSDFTATNIHVTSHGT-----EFTLQTPTGSVDVLLPLPGRHNIANALAAAAL 292

Query: 297 ASVAGADMEMIKNGLETMVSVKGRLNQLKAANGALIIDDTYNASVPAVKAAIDYLATLSG 356
           +   GA ++ IK GL  + +V GRL  +K A   L++DD+YNA+V ++ AA+  LA + G
Sbjct: 293 SMSVGATLDAIKAGLANLKAVPGRLFPIKLAENQLLLDDSYNANVGSMTAAVQVLAEMPG 352

Query: 357 TKLLVLGDMAELGDDSERYHREVGEYAKDRKIDRLLVCGEWVKHSAEAFGEKAHWFETKD 416
            ++LV+GDMAELG +SE  H +VGE AK   ID +L  G+     + A G   H F  K 
Sbjct: 353 YRVLVVGDMAELGAESEACHVQVGEAAKAAGIDCVLSVGKQSHAISTASGVGEH-FTDKT 411

Query: 417 LLVSYLKSIM--QSDYKILVKGSRSARMEQVVDAL 449
            L++ LKS++  Q    ILVKGSRSA ME+VV AL
Sbjct: 412 ALIARLKSLIAEQQVITILVKGSRSAAMEEVVRAL 446