Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 487 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase from Pseudomonas simiae WCS417

 Score =  364 bits (935), Expect = e-105
 Identities = 208/484 (42%), Positives = 297/484 (61%), Gaps = 30/484 (6%)

Query: 35  VNGLQLDSRQIKAGEMFVAYPGHATDGREYIQQAVDSGASVVLFEQDGSETIFKTLLNDN 94
           +  L LDSR ++AG++F+A PG   DGR +I  A+  GA+ V +E +G+  +  T     
Sbjct: 18  IRELSLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVAYEVEGATVLPIT----- 72

Query: 95  QQVAASAKTLSGVYNYKEAVLIPVKNLSQNVSLIAARFYGNPTKKMSVIGVTGTNGKTSC 154
                            +  LIPVK L+  +S IA RFYG+P++++++IGVTGTNGKTS 
Sbjct: 73  -----------------DVPLIPVKGLAAQLSDIAGRFYGDPSRQVNLIGVTGTNGKTSV 115

Query: 155 AYLLAQALEFLQYPTLMLSTVGNGNPNELKATENTTPDAIAIQRLAAEYLQQKNYHMTME 214
             L+AQAL+ L     ++ T+G G    L++  +TTP+ IA+Q   A+  +     + ME
Sbjct: 116 TQLIAQALDLLGQHCGIVGTLGTGFYGALQSGLHTTPNPIAVQATLADLKKAGAKAVAME 175

Query: 215 VSSHGLVQSRVAAVAYKVAIFTNLSQDHLDYHGDMESYFQAKRELFISENLQVAVINADD 274
           VSSHGL Q RVAA+A+ VA+ TNLS+DHLDYHG ME+Y   K +LF   +L+  V+N DD
Sbjct: 176 VSSHGLHQGRVAALAFDVAVMTNLSRDHLDYHGTMEAYAAEKAKLFAWNDLKCRVVNLDD 235

Query: 275 EYGRRLLADEQISCRKIAYSCKEKNDSLNISDWVVAQNQMFNMKGIQAELHTPWGTSKLR 334
            +GR+L A+++ S R I+YS ++       S ++  +   FN +G++A L TP G   LR
Sbjct: 236 AFGRQLAAEDRES-RLISYSLED------ASAYLYCREAQFNDEGVRATLVTPQGEHHLR 288

Query: 335 SGLLGHFNLSNLLAVASALGFLFGDINKWIVALNAAKAVPGRMQSFTKAGKATVVVDYAH 394
           S LLG FNLSN LA   AL  L   +++ +  L   +   GRMQ      +  VVVDYAH
Sbjct: 289 SSLLGRFNLSNTLAAVGALLGLEYALDEILRVLPKLEGPVGRMQRLGGGKQPLVVVDYAH 348

Query: 395 TPDALDKTLGSLREHCDGDLWCVFGCGGDRDNTKRPLMGGVAEQKANHVIITDDNPRTEN 454
           TPDAL+K L +LR H  G L C+FGCGGDRD  KRPLM  + E+ A+ V++TDDNPR+E+
Sbjct: 349 TPDALEKVLVALRPHAKGKLLCLFGCGGDRDRGKRPLMAEIVERLADGVLVTDDNPRSED 408

Query: 455 ADNIVDMIRQGMSN-KNAEYIQKRKEAIKFALTHSAANDMILVAGKGHEDYQQIGTKKIH 513
              I D IR G  +   A ++  R  AI   +  + A+D++++AGKGHEDYQ+I  ++  
Sbjct: 409 PSQIFDDIRVGFKDVSKATFVAGRGVAIAQLIASAGADDVVVLAGKGHEDYQEINGERHA 468

Query: 514 YSDL 517
           +SDL
Sbjct: 469 FSDL 472