Pairwise Alignments

Query, 528 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) from Kangiella aquimarina DSM 16071

Subject, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso- diaminopimelate ligase from Escherichia coli BL21

 Score =  374 bits (959), Expect = e-108
 Identities = 217/505 (42%), Positives = 297/505 (58%), Gaps = 28/505 (5%)

Query: 28  PQLASIEVNGLQLDSRQIKAGEMFVAYPGHATDGREYIQQAVDSGASVVLFEQDGSETIF 87
           P   S  +  + LDSR   AG++FVA  GH  DGR YI QA+  G + ++ E     T  
Sbjct: 15  PDAPSRALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEAT-- 72

Query: 88  KTLLNDNQQVAASAKTLSGVYNYKEAVLIPVKNLSQNVSLIAARFYGNPTKKMSVIGVTG 147
                         + + GV       +I +  L++ +S +A RFY  P+  + ++GVTG
Sbjct: 73  ----------DGEIREMHGV------PVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTG 116

Query: 148 TNGKTSCAYLLAQALEFLQYPTLMLSTVGNGNPNELKATENTTPDAIAIQRLAAEYLQQK 207
           TNGKT+   LLAQ  + L   + ++ TVGNG   ++  TENTT  A+ +Q   A  + Q 
Sbjct: 117 TNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQG 176

Query: 208 NYHMTMEVSSHGLVQSRVAAVAYKVAIFTNLSQDHLDYHGDMESYFQAKRELFISENLQV 267
                MEVSSHGLVQ RVAA+ +  ++FTNLS+DHLDYHGDME Y  AK  L+   +   
Sbjct: 177 ATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHCGQ 236

Query: 268 AVINADDEYGRRLLADEQISCRKIAYSCKEKNDSLNISDWVVAQNQMFNMKGIQAELHTP 327
           A+INADDE GRR LA    +   +A S ++  +      W+ A +  ++  G      + 
Sbjct: 237 AIINADDEVGRRWLAKLPDA---VAVSMEDHINPNCHGRWLKANDVNYHDSGATIRFSSS 293

Query: 328 WGTSKLRSGLLGHFNLSNL---LAVASALGFLFGDINKWIVALNAAKAVPGRMQSFTKAG 384
           WG  ++ S L+G FN+SNL   LA   ALG+   D+ K    L   + V GRM+ FT  G
Sbjct: 294 WGDGEIESHLMGAFNVSNLLLALATLLALGYPLADLLKTAARL---QPVCGRMEVFTAPG 350

Query: 385 KATVVVDYAHTPDALDKTLGSLREHCDGDLWCVFGCGGDRDNTKRPLMGGVAEQKANHVI 444
           K TVVVDYAHTPDAL+K L + R HC G LWCVFGCGGDRD  KRPLMG +AE+ A+  +
Sbjct: 351 KPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAV 410

Query: 445 ITDDNPRTENADNIVDMIRQGMSNK-NAEYIQKRKEAIKFALTHSAANDMILVAGKGHED 503
           +TDDNPRTE    I++ I  GM +  +A+ ++ R EA+  A+  +  ND++LVAGKGHED
Sbjct: 411 VTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTCAVMQAKENDVVLVAGKGHED 470

Query: 504 YQQIGTKKIHYSDLETVADLMEEIA 528
           YQ +G +++ YSD  TVA L+  IA
Sbjct: 471 YQIVGNQRLDYSDRVTVARLLGVIA 495