Pairwise Alignments

Query, 451 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Kangiella aquimarina DSM 16071

Subject, 466 a.a., Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  351 bits (901), Expect = e-101
 Identities = 194/472 (41%), Positives = 270/472 (57%), Gaps = 33/472 (6%)

Query: 1   MRITFLGGTETVTGSKFLLETERTKVLIDCGLYQGYKWLRERNWQSLPLDIDKLDAVLLT 60
           +R+ FLGG +TVTGS++LLE ++TK+LIDCGL+QG K LR+RNW   P+    +D VLLT
Sbjct: 3   IRVKFLGGAQTVTGSRYLLEIDKTKILIDCGLFQGIKELRKRNWDPFPISAAAIDMVLLT 62

Query: 61  HAHLDHSGYIPVLYKHGFRGPVFTHHATKALCQILLADSGHIQEEDAKYYSKHKLSKREQ 120
           HAH+DHSGY+P L K GF+GP+     T  L + LL D+G +QEE+A+Y  +   SK E 
Sbjct: 63  HAHIDHSGYLPKLVKEGFKGPILLTEPTMDLVKTLLLDAGKLQEEEAEYAKRKGFSKHED 122

Query: 121 PEPLYDRHTAESSMALFQSVDFDEQVEV-GDIRFHLQPAGHILGAASIIVEAEG----KR 175
           P PLY    AE        + FD+ + +          AGHILGAA + ++  G    K 
Sbjct: 123 PSPLYTMEDAEEVFDQLSPISFDQPISLTPKATLTAYNAGHILGAAILKIQVRGNHQTKT 182

Query: 176 IGFSGDVGRFDDLLMRPPRPLPELDLLLMESTYGNRQHNPQDAAQQLASVVNRVAKSGSV 235
           I FSGD+GR+ D L+ PP  LP+ D+L +ESTYGNR H      + LA  +N   + G V
Sbjct: 183 IVFSGDLGRYTDPLLNPPIGLPKADILFIESTYGNRSHETNGPEKLLAGAINETYQKGGV 242

Query: 236 LLVPAFAVGRAQALQHLLANLMEQGAIPKLPIYLDSPMAIKVSDIFCHFSDQHHL----- 290
            ++PAFAVGR Q + + L  L ++G IP++PIY+DSPMAI V+ ++      H L     
Sbjct: 243 AVIPAFAVGRTQLVLYYLYKLQQKGMIPQIPIYVDSPMAIDVTKLYKDHLAYHRLGPSLQ 302

Query: 291 -------SHEQCHHMCDLVTYTRTVDESKALAGQAFPHIIIAGSGMATGGRILHHFKRLL 343
                  SH+  H       Y ++ + S +L       III+ SGMATGGRILHH    L
Sbjct: 303 EDGTNPFSHKNLH-------YYQSQEASMSLNNIRGDAIIISASGMATGGRILHHLYNRL 355

Query: 344 SDSRTMVLFTGYQAGGTRGAKMLEGVDAVKIHGNWIPLRAEVDEISGLSGHADYLELTKW 403
            +    ++F GYQA GTRG K+L+G + V+++G  +P +A +  I GLS HAD  EL +W
Sbjct: 356 PNENDSIIFVGYQAKGTRGRKLLDGEERVRMYGIDVPAKASIHYIDGLSAHADQDELLRW 415

Query: 404 ----LHQSKLTKTTPIKLIHGDPEALEGLRVHLQEHTQFKVDVAGYRDILSL 451
                 + KLT      ++HG+ E        L+E   +   V  Y +   L
Sbjct: 416 ADCIAEKPKLT-----FVVHGEQEVSAAFAHTLKETFGWNTIVPDYLESFEL 462