Pairwise Alignments

Query, 271 a.a., exodeoxyribonuclease III from Kangiella aquimarina DSM 16071

Subject, 258 a.a., exodeoxyribonuclease III from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 2e-34
 Identities = 90/270 (33%), Positives = 132/270 (48%), Gaps = 16/270 (5%)

Query: 1   MKIVTFNINSIRTRAHQIEALVEKHDPDIICIQETKVHDDAFPFELYEHLGYHIEIHGGK 60
           MK+ T+N+N I  R   +   + +  PD++C+QE K  +D FP    E  GY     G K
Sbjct: 1   MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60

Query: 61  AHYGVATFSK-QKPLAVEKGFPTDPDDAQRRMIITSFQYGNEVIKVLNGYFPQGENREHP 119
           +  GVA  ++ Q+P    +G P DPDD+  R I  +      VI  L  Y P G     P
Sbjct: 61  SWNGVAILARDQEPRETRRGLPGDPDDSHSRYIEAAID--GIVIGCL--YLPNGNPAPGP 116

Query: 120 VKFPYKQKFYADLLTY-LQNDKGDHRTIVLGDINISPEDIDIGIGEPNRKRWLRDGKCSF 178
            KF YK +++  L +Y  +  + D    ++GD N+ P D+D+   E    RW  D    F
Sbjct: 117 -KFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDVYKPE----RWRDD--ALF 169

Query: 179 LPEEREWLQKILATGLHDTYRTINPDVDDKFSWFDYRSRGFERDPKRGLRIDSVFACDWL 238
            PE R    +++A G  D  R ++P+ +  ++++ Y    F RD   GLRID       L
Sbjct: 170 RPEVRAAYAELIAMGWTDAVRLLHPE-ERIYTFWKYFRNAFARD--AGLRIDHFLLSPSL 226

Query: 239 NDRAVASDIDYEIRSMERPSDHAPVWTEFD 268
            +R     +D   R+ E  SDHAPVW E D
Sbjct: 227 RERLQTCGVDKFARAWEHTSDHAPVWIELD 256