Pairwise Alignments

Query, 339 a.a., Holliday junction DNA helicase subunit RuvB from Kangiella aquimarina DSM 16071

Subject, 348 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Pseudomonas putida KT2440

 Score =  485 bits (1248), Expect = e-142
 Identities = 245/328 (74%), Positives = 284/328 (86%)

Query: 1   MIEHDRIITPSEFADEDQFDRAIRPTTLDEYVGQEKVREQMEIFLGAAKKRQEALDHVLI 60
           MIE DR+I  S    E+  DRAIRP +LDEY+GQ  VREQM +F+ AA+ R E+LDH LI
Sbjct: 1   MIEADRLIAASGRDREEVQDRAIRPLSLDEYIGQPVVREQMALFIQAARGRGESLDHTLI 60

Query: 61  FGPPGLGKTTLSNIIANEMGVGIKHTSGPVLEKAGDLAAMLTNLEPNDVLFIDEIHRLSP 120
           FGPPGLGKTTL+NIIA+EMGV +K TSGP+LE+ GDLAAMLTNLEP+DVLFIDEIHRLSP
Sbjct: 61  FGPPGLGKTTLANIIAHEMGVSVKSTSGPILERPGDLAAMLTNLEPHDVLFIDEIHRLSP 120

Query: 121 HVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGLLTSPLRDRFGIVQR 180
            VEEVLYPAMED+QLDIMIGEGPAARSIK+DLPPFTLVGATTRAG+LT+PLRDRFGIVQR
Sbjct: 121 VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR 180

Query: 181 LEFYNLKDLTHIVMRSARILDLPIEEKGALEIARRSRGTPRIANRLLRRVRDYAEIKSDG 240
           LEFYN KDL+ IV RSA IL L IE++GA EIARR+RGTPRIANRLLRRVRDYAE++  G
Sbjct: 181 LEFYNDKDLSTIVSRSANILGLAIEDQGAYEIARRARGTPRIANRLLRRVRDYAEVRGKG 240

Query: 241 VITQNISDRALDMLDVDHKGFDMMDRKLLLTIIEKFAGGPVGLDTLAAAIGEERDTIDEV 300
            IT+ ++D AL++LDVD +GFD  DR+LLLT+IEKF GGPVG+D LAAAI EER TI++V
Sbjct: 241 QITKAVADMALNLLDVDERGFDHSDRRLLLTMIEKFDGGPVGVDNLAAAISEERHTIEDV 300

Query: 301 LEPFLIQQGFIQRTPRGRIATKLAYQHF 328
           LEP+LIQQG+I RTPRGR+ T+ AY HF
Sbjct: 301 LEPYLIQQGYIMRTPRGRVVTRHAYLHF 328