Pairwise Alignments

Query, 176 a.a., Holliday junction endonuclease RuvC (EC 3.1.22.4) from Kangiella aquimarina DSM 16071

Subject, 173 a.a., Holliday junction resolvase (NCBI) from Escherichia coli BW25113

 Score =  198 bits (504), Expect = 4e-56
 Identities = 107/178 (60%), Positives = 135/178 (75%), Gaps = 7/178 (3%)

Query: 1   MPIILGIDPGSRLTGFGII-EVGGQIPANRPRYITSGCIRIKDETLDLKLKQIFDSVCEL 59
           M IILGIDPGSR+TG+G+I +VG Q+      Y+ SGCIR K + L  +LK I+  V E+
Sbjct: 1   MAIILGIDPGSRVTGYGVIRQVGRQLS-----YLGSGCIRTKVDDLPSRLKLIYAGVTEI 55

Query: 60  IQEFKPDEFAIESVFLSKNADSALKLGQARGAAIVAASHYALPVSEYPARKVKQSVVGTG 119
           I +F+PD FAIE VF++KNADSALKLGQARG AIVAA +  LPV EY AR+VKQ+VVG G
Sbjct: 56  ITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIG 115

Query: 120 GADKTQVQHMVKTLLKLPTSPQADAADALAVALCHANTTQGLAQLKGVK-TITRGRLR 176
            A+K+QVQHMV+TLLKLP +PQADAADALA+A+ H + +Q   Q+   +  + RGRLR
Sbjct: 116 SAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR 173