Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 390 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  369 bits (948), Expect = e-107
 Identities = 193/383 (50%), Positives = 259/383 (67%), Gaps = 10/383 (2%)

Query: 1   MSETLALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDT----SNFWSLRHG 56
           M++TL L++ LI  PSVTP D GCQ M+   L  LGF  E +         +N W+ R G
Sbjct: 1   MTDTLRLTEALIACPSVTPRDEGCQAMIGARLARLGFACETIESGPADFRVTNLWA-RLG 59

Query: 57  RTEGPVFVFAGHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRF 116
           +   P  VFAGHTDVVP GPL  W + PF  + ++G L+GRG +DMK+SLAAM+VA + F
Sbjct: 60  QGRRPTLVFAGHTDVVPTGPLTAWTSDPFVPSHRDGKLFGRGTADMKTSLAAMVVACEEF 119

Query: 117 VKDYPEHIGSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIK 176
           V   P     + FL+TSDEEGP ++GTV V + L +R + LD+C+VGEP+S E+ GD+IK
Sbjct: 120 VAANPAPAIDVAFLLTSDEEGPALDGTVVVCDALRQRGERLDWCIVGEPTSVERTGDMIK 179

Query: 177 NGRRGSLTGFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIA 236
           NGRRG+++G LT+KG QGH+AYPHLA N IH +  AL EL  T WD+GN FFP TS+QI+
Sbjct: 180 NGRRGTMSGKLTVKGIQGHIAYPHLAKNPIHLAAPALAELTATVWDEGNAFFPPTSWQIS 239

Query: 237 IIKAGT-AGNVIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNL----EYDLNWKLNG 291
            I  GT A NVIPG   ++FNFR+STE+T + LQQ+V  +L ++ L    ++DL+W L G
Sbjct: 240 NIHGGTGASNVIPGTVVIDFNFRFSTESTPEGLQQRVAELLQRHGLQPGADFDLDWTLGG 299

Query: 292 EPFLTDHGHLLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQI 351
            PFLT  G L+ A R A+ A   I+T   TTGGTSDGRFIA+   +++E+GP N TIH+I
Sbjct: 300 RPFLTQPGTLVDAVRAAVHAEVGIDTTLSTTGGTSDGRFIAQVCPQVIELGPPNATIHKI 359

Query: 352 NECVKIEDLDKLTEVYYQILVEL 374
           +E V + D++ L  +Y + L  L
Sbjct: 360 DEHVAVADIEPLKNIYRRTLEHL 382