Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase (NCBI) from Escherichia coli BW25113

 Score =  437 bits (1124), Expect = e-127
 Identities = 215/373 (57%), Positives = 278/373 (74%), Gaps = 4/373 (1%)

Query: 5   LALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDTSNFWSLRHGRTEGPVFV 64
           + L++ LI RPS++P+DAGCQ ++++ L+A+GF  E M+F DT NFW+ R    +G    
Sbjct: 6   IELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMDFADTQNFWAWRG---QGETLA 62

Query: 65  FAGHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRFVKDYPEHI 124
           FAGHTDVVP G  + W  PPFE T ++G L+GRGA+DMK SLAAM+VA +RFV  +P H 
Sbjct: 63  FAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKGSLAAMVVAAERFVAQHPNHT 122

Query: 125 GSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGRRGSLT 184
           G + FLITSDEE    NGTV+VVE LM RN+ LDYC+VGEPSS E  GDV+KNGRRGSLT
Sbjct: 123 GRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLVGEPSSIEVVGDVVKNGRRGSLT 182

Query: 185 GFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIKAGT-A 243
             LTI G QGHVAYPHLADN +H++   L+EL   EWDQGN+FFPATS QIA I+AGT +
Sbjct: 183 CNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIEWDQGNEFFPATSMQIANIQAGTGS 242

Query: 244 GNVIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNLEYDLNWKLNGEPFLTDHGHLLT 303
            NVIPGE +V+FNFR+STE T + ++ +V+A+L+K+ L Y ++W L+G+PFLT  G L+ 
Sbjct: 243 NNVIPGELFVQFNFRFSTELTDEMIKAQVLALLEKHQLRYTVDWWLSGQPFLTARGKLVD 302

Query: 304 AARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINECVKIEDLDKL 363
           A  NA+    +I    LTTGGTSDGRFIA+ GA++VE+GPVN TIH+INECV   DL  L
Sbjct: 303 AVVNAVEHYNEIKPQLLTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVNAADLQLL 362

Query: 364 TEVYYQILVELLA 376
             +Y +I+ +L+A
Sbjct: 363 ARMYQRIMEQLVA 375