Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 386 a.a., succinyl-diaminopimelate desuccinylase from Caulobacter crescentus NA1000 Δfur

 Score =  251 bits (640), Expect = 3e-71
 Identities = 152/374 (40%), Positives = 207/374 (55%), Gaps = 12/374 (3%)

Query: 3   ETLALSKDLINRPSVTPEDAGCQQMMMQYLEALGFKNEIMNFEDTSNFWSLRHGRTEGPV 62
           + + L++ LI RPSVTP DAG    + + LEALGF    M F +  N ++ R   T  P 
Sbjct: 12  DPVELAQALIRRPSVTPADAGAMDTLQRQLEALGFACRRMKFGEIENLYARRG--TARPN 69

Query: 63  FVFAGHTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRFVKDYPE 122
             FAGHTDVVP G    W   PFEA  KEG LYGRGA DMKS++AA + A    V + P+
Sbjct: 70  LCFAGHTDVVPVGDDAAWTAGPFEAEIKEGVLYGRGAVDMKSAIAAFVAA----VANVPD 125

Query: 123 HIGSIGFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGRRGS 182
           H GSI FLIT DEEG   +GTV+VVE L    + +D+C+VGEP+S+   GD++K GRRGS
Sbjct: 126 HPGSISFLITGDEEGVAEDGTVKVVEALAAEGEIIDHCIVGEPTSANLLGDMVKIGRRGS 185

Query: 183 LTGFLTIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIKAG- 241
           +  ++T++G QGHVAYPH A N +   +  L  L     D G   F  ++ +I  I  G 
Sbjct: 186 INAWITVEGRQGHVAYPHRAANPVPVLVDILSALKARVLDDGYTGFQPSNLEITTIDVGN 245

Query: 242 TAGNVIPGEKYVEFNFRYSTETTHQELQQKVVAVLDKYNLEYD----LNWKLNGEPFLTD 297
           TA NVIP       N R++     ++L   +     K    +D       K++GE FLT+
Sbjct: 246 TATNVIPAAAKARVNIRFNPAHKGKDLAAWIEGECAKAAEGFDGAATALCKISGEAFLTE 305

Query: 298 HGHLLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINECVKI 357
            G        A+           TTGGTSD RFI +    +VE G V  T+HQ++E V +
Sbjct: 306 PGDFTDVIVAAVTDATGRAPELSTTGGTSDARFI-RALCPVVEFGLVGSTMHQVDERVPV 364

Query: 358 EDLDKLTEVYYQIL 371
           E++ +L   Y  ++
Sbjct: 365 EEVRQLAGAYEALI 378