Pairwise Alignments

Query, 381 a.a., succinyldiaminopimelate desuccinylase (EC 3.5.1.18) from Kangiella aquimarina DSM 16071

Subject, 398 a.a., succinyl-diaminopimelate desuccinylase from Agrobacterium fabrum C58

 Score =  255 bits (651), Expect = 2e-72
 Identities = 149/373 (39%), Positives = 207/373 (55%), Gaps = 17/373 (4%)

Query: 11  LINRPSVTPEDAGCQQMMMQYLEALGFKNE-IMNFEDTSNFWSLRHGR--TEGPVFVFAG 67
           LI  PSVTP + G   ++   L  LGF  E +M  ED +      + R  TEGP  +FAG
Sbjct: 13  LIRCPSVTPAEGGALSLLDTLLSPLGFAVERVMATEDGTPDVENLYARLGTEGPHLMFAG 72

Query: 68  HTDVVPAGPLENWHTPPFEATEKEGYLYGRGASDMKSSLAAMLVATKRFVKDYPEHIGSI 127
           HTDVVP G    W  PPF A    G +YGRGA DMK  +A  + A  R +  + +  GS+
Sbjct: 73  HTDVVPVGDEAAWSHPPFSADIAGGEMYGRGAVDMKGGIACFVAAIARHIGKHGKPQGSV 132

Query: 128 GFLITSDEEGPFINGTVRVVEELMKRNQPLDYCVVGEPSSSEQFGDVIKNGRRGSLTGFL 187
            FLIT DEEGP INGT +++E    + +  D CVVGEP++ +Q GD+IK GRRGSL+G +
Sbjct: 133 SFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMIKIGRRGSLSGRI 192

Query: 188 TIKGTQGHVAYPHLADNAIHKSLKALDELAHTEWDQGNQFFPATSFQIAIIKAGTAG-NV 246
           T++G QGH AYPHLADN I   L+    L H  +D G   F  ++ ++  +  G A  NV
Sbjct: 193 TVQGVQGHAAYPHLADNPIRGLLQLTHALMHPAFDHGTDDFQPSNLEVTTVDTGNAATNV 252

Query: 247 IPGEKYVEFNFRYSTETTHQELQQKVVAVL-----------DKYNLEYDLNW-KLNGEPF 294
           IP      FN R++   T + L+ +++  L           D+  ++Y++ W       F
Sbjct: 253 IPARATAAFNIRFNDSWTAESLRAEIIRRLDAAANEGELRPDRAPVKYEIVWADRPSHVF 312

Query: 295 LTDHGHLLTAARNAIRAVCQINTAPLTTGGTSDGRFIAKTGAEIVEIGPVNKTIHQINEC 354
           LT +  L+++   AI  V        TTGGTSD RFI K    +VE G V +T+H ++E 
Sbjct: 313 LTRNNALISSLSGAIETVTGKEPKLSTTGGTSDARFI-KDYCPVVEFGLVGQTMHMVDER 371

Query: 355 VKIEDLDKLTEVY 367
           V + DL+ LT +Y
Sbjct: 372 VAVADLETLTRIY 384