Pairwise Alignments

Query, 514 a.a., FOG: LysM repeat from Kangiella aquimarina DSM 16071

Subject, 476 a.a., Membrane-bound lytic murein transglycosylase D from Pseudomonas putida KT2440

 Score =  283 bits (723), Expect = 1e-80
 Identities = 184/484 (38%), Positives = 259/484 (53%), Gaps = 53/484 (10%)

Query: 1   MKRLLLISCLGLTACSTLV-----KQEDTVNDPRFDNPQTTEDGSPLPAPELDNNNPLLL 55
           + RL  IS L L A  TLV     +Q D  +  R  N Q      P         +PLL+
Sbjct: 14  LTRLAQISALALAA--TLVGCQSTRQLDESDSVRAHNYQARIKHKP---------SPLLV 62

Query: 56  SDSEVAPFVPNLWEHLASEQSFANVQ----HPRIDAFREQYLKSPHLLLKRADKAAPYLY 111
             +E AP   ++WE +   Q FA       +PRI+  R  +  +P  +    ++ + YL+
Sbjct: 63  KPAEQAP--QDVWERM--RQGFALQDSIDVNPRIEQQRLWFASNPTFIESAGERGSLYLH 118

Query: 112 YIITELENRNMPVELAFTPMVESNFDPLAHSVVQAAGMWQFMPKTAKGFGITIDEWYDGR 171
           YI+  LE R+MP+ELA  P +ES ++P+A+S   AAGMWQFMP T + F +    +YDGR
Sbjct: 119 YIVERLEERDMPLELALLPAIESAYNPMAYSRASAAGMWQFMPATGRHFNLRQTNFYDGR 178

Query: 172 RDIVASTHAALDYYQYLNKMFDGDWLLTVAAYNVGPGNVMKAIRANKRQGKPTDYWSLKL 231
           RD+ AST+AALDY   L+ MF+GDWLL +AAYN G G V +AI  N+R G PTDYW+L L
Sbjct: 179 RDVTASTNAALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNERLGLPTDYWNLPL 238

Query: 232 PKETMRHIPKWLALSDIFLNAPKYQVDLPLIDNQPAFVEVEVDAPANLMELAKIAQIDKD 291
           P+ET  ++PK LALS +      Y V+L  I N+P F  V ++   +L  +A  A ID+D
Sbjct: 239 PQETRDYVPKLLALSQVVSTPEAYGVNLTPIANEPYFEAVAINDRLDLSRVAAFANIDED 298

Query: 292 TFYRLNPAYNRLFVPEHHKKATILVPVETVDHFNQGLLEIDPKQLMA------------- 338
              +LNPA+ +    +  K+  +LVP       +  L  ++P+QL++             
Sbjct: 299 ELIQLNPAFKKRMTVDGPKQ--LLVPTAKAQLLSASLSNLNPEQLVSLQPPKAAFARAVA 356

Query: 339 -------SVSYKVKSGDNLSLIAKRHNTSVKTIKQLNGLKSDFLKIGQELKMPGIINATE 391
                  + SY+VK GDNLS IAK +  SVK IK+ N L  + L+ GQ L + G  +A  
Sbjct: 357 EAKAPVGARSYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSLRAGQVLALRG-GSAPS 415

Query: 392 YEKNFFATLSKNQQRRRYQVYNVRSGDSLWTIAKKFGVSTRQLANWNGIAQNSTIRIGQK 451
              N  A   K     R   Y VR GDSL+ +AK+F V  + L  WN       ++ GQ 
Sbjct: 416 AAGNRVAASGK-----RSTQYKVRKGDSLYLVAKRFNVEMKHLKRWNP-RSGHALKPGQT 469

Query: 452 LKVW 455
           L V+
Sbjct: 470 LTVY 473



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 468 SYQVKSGDSLYTIARRFNVKVSDLTKWNGLKNASLIKPGQTLTI 511
           SY+VK GD+L  IA+   V V D+ +WN L   SL + GQ L +
Sbjct: 366 SYRVKRGDNLSAIAKANRVSVKDIKRWNRLSGNSL-RAGQVLAL 408