Pairwise Alignments

Query, 393 a.a., RND family efflux transporter, MFP subunit from Kangiella aquimarina DSM 16071

Subject, 400 a.a., efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  129 bits (323), Expect = 2e-34
 Identities = 108/391 (27%), Positives = 171/391 (43%), Gaps = 29/391 (7%)

Query: 14  LLDHKRTAALIAIMLPLALLFIYVVVRSGPLAPTLVTQIQVSKVSISPALFGIGTVEARY 73
           L  H R A L A++L  A L I  +V  G     +  ++ V    +   ++G+GT+EA+ 
Sbjct: 20  LRSHPRLAVLFAVVL--AGLVIGRLVLGG-----VSVEVAVPSGQVPIRVYGLGTIEAKV 72

Query: 74  QYKVGPTIPGRVQTLKVDIGDQVTKGQLLGVMDSVDLEQRMEAQQSALMQAKAKLQEAQT 133
             K+G  + G +  L  D G  V+KGQ+L  +D  D EQR +   +     KA  Q A  
Sbjct: 73  SSKIGFAVAGTLVDLGADAGQSVSKGQVLARLD--DAEQRAKVSAARAQYEKALAQSASA 130

Query: 134 RYQFSDEQFKRYQK---------LLESNSISEEQF-------LVKQQDYHIAEAGLAAAR 177
           R   +     R QK         L+ S ++SEE F       +    D   A A +A A 
Sbjct: 131 RAIVAKTAVNRAQKEKVSQRRKSLVASGTVSEETFGDAHAAAVSAGADAQAANAEVALAL 190

Query: 178 QELLRQEAEQKAMQAQQHNLDLISPIDGIVVKRNAEQGTTVVAGQSVIEIINPEDIWINV 237
             L    A+ +  +       L +P DG +  R+ E G+ V  G+ V  + +   +W+  
Sbjct: 191 ATLADARAQLELNEVLLARHSLTAPYDGRISLRSRELGSVVAPGEGVFTLFDLHSVWVLA 250

Query: 238 RFDQIHSTGLNPGLTALVNLRSKSKLDLSGKIYRVEPIADAVTEEFLAKVTIDELPQPLP 297
             D+  +  +  G  A V LRS      +G++ R++  +D  TEE    V   E PQ L 
Sbjct: 251 YVDETLAGDVALGQGAEVRLRSAPAKRFAGRVVRIDIESDRTTEERKIYVACAECPQHL- 309

Query: 298 SIGELAEVTIELDSLPSTTVIPNAALKRIDGELGV-WKIIDGDIEYVPVSIGATDLDGLV 356
             GE AEV I+   +    ++P  A++  DG  G+ W +  G +   P+S G   LDG +
Sbjct: 310 --GEQAEVVIDTALVDGAILVPATAVEGFDGRQGMAWVVEGGRLARRPLSFGHRTLDGRL 367

Query: 357 EIKKGLSLGESVVLHSEKALTANSRIKVVES 387
            +  GL     VV      L     ++  ++
Sbjct: 368 VVTGGLPEAGRVVTRLVSGLAEGRSVRTTDA 398