Pairwise Alignments

Query, 455 a.a., DNA replication and repair protein RadA from Kangiella aquimarina DSM 16071

Subject, 458 a.a., DNA repair protein RadA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  504 bits (1298), Expect = e-147
 Identities = 261/458 (56%), Positives = 334/458 (72%), Gaps = 9/458 (1%)

Query: 1   MGKVKTIYVCQECGSETPQWAGQCGACKAWNSMVEQVDAKKVSSTAKSSRFTGYAGQDSK 60
           M K KT Y+C ECG  +P+W G+C  C AWN++VE V      STA +        + ++
Sbjct: 1   MAKEKTQYICSECGGASPKWLGKCPHCNAWNTLVESV----AESTAPAKNRFAALAKTAE 56

Query: 61  VVKMDKVDLSELPRMSSGLSELDRVLGGGLVPGSVVLMGGDPGIGKSTILLQSLCKISET 120
           V  +  ++ +++ R  +G  ELDRVLGGG+V G VVL+GGDPGIGKST+LLQ+L  +  +
Sbjct: 57  VTTLADIEATDVQRTPTGHDELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQALDSLQRS 116

Query: 121 -DSVLYVTGEESLQQVTMRAQRLGLATGDFSLLTETQVEQITTQALMQKPKVMVVDSIQT 179
               LYVTGEES  QV +R++RLGL     S+L E Q+E+I       +P + V+DSIQT
Sbjct: 117 GQKTLYVTGEESGAQVALRSRRLGLDGSQVSVLAEIQLEKILATLESTRPAIAVIDSIQT 176

Query: 180 IYTEMLQSAPGGVAQVRESAAQLVRFAKQTGITLLVVGHVTKDGALAGPRVLEHMVDAVL 239
           +Y+E L SAPG VAQVRE AA L R AK +G  +++VGHVTK+GALAGPRVLEHMVD VL
Sbjct: 177 VYSEQLTSAPGSVAQVRECAAHLTRAAKASGTAIVLVGHVTKEGALAGPRVLEHMVDTVL 236

Query: 240 YFEGERDGRLRLLRAVKNRFGAVNELGVFAMTDEGLKQVKNPSAIFLSKYQDPVAGSAVM 299
           YFEG+     RL+RA+KNRFGAVNE+GVFAMT++GLK V NPSAIFLS++ +PV GS VM
Sbjct: 237 YFEGDTHSSFRLIRAIKNRFGAVNEIGVFAMTEKGLKGVSNPSAIFLSQHSEPVPGSCVM 296

Query: 300 ATWEGTRPMLVEIQALVDTSHAPQPRRIAVGLDHQRIAMLLAVLNRHAGIATYDQDVFAN 359
            T EGTRPMLVEIQALVD S  P PRR++VGLD  R+AMLLAVL+RHAG+A  DQDVF N
Sbjct: 297 VTLEGTRPMLVEIQALVD-SGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVN 355

Query: 360 VVGGVRVMETSSDLALVASIISSLRNRPLEEHTVIFGEIGLAGEIRPVPNGQERLKEAAK 419
            VGGVR+ E ++DLA++ SI SSLR +PL +  + FGE+GLAGE+RP P GQ+RLKEAAK
Sbjct: 356 AVGGVRINEPAADLAVMLSITSSLRGKPLPKGFLAFGEVGLAGEVRPAPRGQDRLKEAAK 415

Query: 420 HGFKRAIVPEGNKPQ---KPFDGMEVIGVSRMAQFIQL 454
            GF  A+VP+ N P+   K F+G+ V GV R+ + ++L
Sbjct: 416 LGFSVAVVPKANLPRKNDKAFEGLTVHGVDRIEEAMEL 453