Pairwise Alignments

Query, 269 a.a., DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) from Kangiella aquimarina DSM 16071

Subject, 279 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Magnetospirillum magneticum AMB-1

 Score =  179 bits (453), Expect = 8e-50
 Identities = 113/280 (40%), Positives = 151/280 (53%), Gaps = 12/280 (4%)

Query: 1   MPELPEVETTKNGLAPHIVGKPIKAVNIYQPQLRWPIAVE-AKALVGITSGEIRRRAKYM 59
           MPELPEVET   GLA    G+   +V   +  LR P   + A+ L G T   + RRAKY+
Sbjct: 1   MPELPEVETVARGLAQVWDGRRFVSVETRRAGLRVPFPKDFARRLTGRTVEAVGRRAKYL 60

Query: 60  LWEFPSGSLVM-HLGMSGTMRVVSAQTALK-KHDHFEVVFEDGSALRFNDPRRFGAILWQ 117
           +     G +++ HLGMSG M + + +      HDH E V + G ++   DPRRFG     
Sbjct: 61  VVRLDGGLVMLGHLGMSGRMTIGALRNEPPGPHDHVEWVTDQGISVTLTDPRRFGLFALC 120

Query: 118 PAGETLS--VLSQLGPEPLSDDFDGKYLHTALSKRKGAIKNAIMDNKVVVGVGNIYASES 175
            A +     +L+ +GPEPL + FD   L  AL+ + G IK  ++D KVV G+GNIY  ES
Sbjct: 121 EASDLGGHPLLAGIGPEPLDEAFDAGVLAKALAGKTGPIKTVLLDQKVVAGLGNIYVCES 180

Query: 176 LFMSGIHPKRAANKVSLARCNLLAGFIKAVLEKAIGEGGTTLKDFTQTDGSPGYFAQQLN 235
           LF + I P R A  +S A    L   IKAVL +A+  GG+TL+D  + DG  GYF     
Sbjct: 181 LFRAEISPLRPAGSLSRAEVGRLVPLIKAVLSEAVAAGGSTLRDHARPDGELGYFQHSFQ 240

Query: 236 VYGRADLPC------NQCGSLIKKQIIGQRSSFYCPKCQR 269
           VYGR    C        CG +++    G RS+FYC K QR
Sbjct: 241 VYGREGETCPGCPGAPACGGILRMTQAG-RSTFYCAKRQR 279