Pairwise Alignments

Query, 696 a.a., type IV pilus secretin (or competence protein) PilQ from Kangiella aquimarina DSM 16071

Subject, 703 a.a., general secretion pathway protein GspD from Pseudomonas simiae WCS417

 Score =  119 bits (299), Expect = 4e-31
 Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 29/284 (10%)

Query: 426 VSVDQRTNTILVQDVATKLEDVRRLVAQLDIPVRQVLIEARIVTADDGFARDLGSRFGVS 485
           ++  + +N +LV+    + +++   + +LD P  QV IE RI+        DLG ++ + 
Sbjct: 406 ITAQKSSNQLLVRTRPAQWKEIEAAIKRLDNPPLQVQIETRILEVKLTGELDLGVQWYLG 465

Query: 486 DVMNSGEVNSDFNVNLPIANPAGSLG--------------LSFARLQDGIVVDMELSALE 531
            +  +    +       +AN +GS G              L ++ +   + V   L ALE
Sbjct: 466 RLAGNSSSTT-------VANASGSQGALGGGGAGLGATDSLFYSFVSSNLQV--ALHALE 516

Query: 532 SENRGEVVASPKVITANQKEAYIKAGEEIPYQQSSGGAGGQTT----IQFKEAVLELRVT 587
           +  R +V+++P ++  N + A I+ G+ IP  Q++   G   T    +++ +  + L V 
Sbjct: 517 TNGRTQVLSAPSLVVMNNQPAQIQVGDNIPINQTTVNTGDADTTLSSVEYVQTGVILDVV 576

Query: 588 PQITPDGNVILDLRI-IQDTRGESLIFDGVAAAPAINTQEVGTQVLVENGETIVLGGIFQ 646
           P+I P G V +D++  + D   +S   D     P I+T+ V TQV V++G+T++LGG+ +
Sbjct: 577 PRINPGGLVYMDIQQQVSDAENQSTNSD-TPVNPRISTRSVSTQVAVQSGQTVLLGGLIK 635

Query: 647 HRTTYDESKVPLLGDIPLLGWLFKNTQREDTKQELLIFVTPKII 690
                  S VP LG IP L WLF +T +   + EL++ +TPK+I
Sbjct: 636 QDNQESVSAVPYLGKIPGLRWLFGSTSKSKDRTELIVLITPKVI 679