Pairwise Alignments

Query, 369 a.a., Uncharacterized protein required for cytochrome oxidase assembly from Kangiella aquimarina DSM 16071

Subject, 359 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  262 bits (669), Expect = 1e-74
 Identities = 154/374 (41%), Positives = 215/374 (57%), Gaps = 44/374 (11%)

Query: 8   KFAIFASILALCVILLGAWTRLSDAGLGCPDWPGCYGHFTVPQDADYIKQAEVEYNQ-VF 66
           + A+FA++LAL V+LLGA+TRL+ AGLGCPDWPGCYG  +VP+    +  AE+ + +   
Sbjct: 7   RLAVFATLLALLVVLLGAYTRLTHAGLGCPDWPGCYGFISVPKTDVQLAHAELHFPEHPV 66

Query: 67  EADKAWPEMIHRHFAKAIGLVIIILFVGAWKGRRKDPSIPVLLPSILLPLVIFQGLLGMW 126
           EA K W EM+HR+FA ++ +VI +L   A +   +D   P  LP +LL +V+ Q   GMW
Sbjct: 67  EAAKGWAEMVHRYFAGSLAVVIALLAFQAMRRHARDGQ-PYRLPMLLLGVVLAQAAFGMW 125

Query: 127 TVTLKVHPFVVMLHLLGGFSILSLLFLYILQLRPKIVSLSQVVAKKFKKLAMVSLVLVIL 186
           TVTLK+ P VV  HLLGGF+ LSLLFL  L+L      L ++     +++A ++L++VI 
Sbjct: 126 TVTLKLWPQVVTAHLLGGFTTLSLLFLLSLRLSRAFAPLPKLPLS-LRRIAALALLVVIG 184

Query: 187 QIALGGWTAANYAATACTELPFCNDGWTQNVDFKGGYDLWQKGFEFDEFKALEQEKFEAD 246
           QIALGGW +ANYAA AC +LP C+  W    DF  G+ L Q                   
Sbjct: 185 QIALGGWVSANYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGP--------------- 229

Query: 247 LAKAQGEPFINYEGGVLSHDQKVAIHVSHRIGAYIVFLIVGLLALLMIREKDSVLIRHFG 306
                     NY GG L  D + AIH+SHR+GA +V  ++ +L+  + R      +    
Sbjct: 230 ----------NYLGGQLDSDARTAIHISHRLGALLVTCVLLMLSWKLHR----CGLPGLS 275

Query: 307 RALALVLIGQMLLGFSNIIFALPLYVAVAHNGGGAILLLTVLAVNFLV------------ 354
           R + L L  Q+ LG SN++F LPL VAVAHN GGA+LLL+++ VN+ +            
Sbjct: 276 RLVLLALALQVGLGISNVVFHLPLAVAVAHNAGGAMLLLSMVLVNYRIRVVDKVRVGVGH 335

Query: 355 NWQFRQAKQVGGKH 368
            W+ R    VG  H
Sbjct: 336 GWRLRPVVGVGISH 349



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 6/158 (3%)

Query: 5   TLRKFAIFASILALCVILLGAWTRLSDAGLGCPDWPGCYGHFTVPQDAD---YIKQAEVE 61
           +LR+ A  A ++ +  I LG W   + A + C D P C+G +    D     ++ Q    
Sbjct: 170 SLRRIAALALLVVIGQIALGGWVSANYAAVACIDLPTCHGQWWPAADFSNGFHLTQHVGP 229

Query: 62  YNQVFEADKAWPEMIHRHFAKAIGLVIIILFVGAWKGRRKDPSIPVLLPSILLPLVIFQG 121
                + D      IH        LV  +L + +WK  R    +P L   +LL L +  G
Sbjct: 230 NYLGGQLDSDARTAIHISHRLGALLVTCVLLMLSWKLHR--CGLPGLSRLVLLALALQVG 287

Query: 122 LLGMWTVTLKVHPFVVMLHLLGGFSILSLLFLYILQLR 159
            LG+  V   +   V + H  GG  +L  + L   ++R
Sbjct: 288 -LGISNVVFHLPLAVAVAHNAGGAMLLLSMVLVNYRIR 324