Pairwise Alignments

Query, 726 a.a., Superfamily I DNA and RNA helicases from Kangiella aquimarina DSM 16071

Subject, 720 a.a., DNA-dependent ATPase I and helicase II (NCBI) from Escherichia coli BW25113

 Score =  883 bits (2282), Expect = 0.0
 Identities = 434/725 (59%), Positives = 555/725 (76%), Gaps = 5/725 (0%)

Query: 1   MDASSIIQPLNDAQKEAVTAPNKALLVLAGAGSGKTRVLVHRIAWLVQVERVSAHSILAV 60
           MD S ++  LND Q+EAV AP   LLVLAGAGSGKTRVLVHRIAWL+ VE  S +SI+AV
Sbjct: 1   MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60

Query: 61  TFTNKAAKEMLGRVEDMLAMPARGMWIGTFHSIAHRLLRAHYRDAGLPEGFQILDAQDQL 120
           TFTNKAA EM  R+  ++     GMW+GTFH +AHRLLRAH+ DA LP+ FQILD++DQL
Sbjct: 61  TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120

Query: 121 RVIKRVMKELNLDDNEWPPKQAQWFINAKKDDGLRPGDIHHHGDFFVSTMVKVYYAYEEA 180
           R++KR++K +NLD+ +WPP+QA W+IN++KD+GLRP  I  +G+    T  KVY AY+EA
Sbjct: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180

Query: 181 CKRGGLVDFNELLLRAYELWANNPHLLKHYQDRFQHILVDEFQDTNAIQYAWIRLLCNDN 240
           C R GLVDF ELLLRA+ELW N PH+L+HY++RF +ILVDEFQDTN IQYAWIRLL  D 
Sbjct: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240

Query: 241 NRITIVGDDDQSIYGWRGARIENIQQFEKDFPDCKVSRLEQNYRSTSTILKAANAVIANN 300
            ++ IVGDDDQSIYGWRGA++ENIQ+F  DFP  +  RLEQNYRSTS IL AANA+I NN
Sbjct: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300

Query: 301 QDRMGKSLWTEGNQGEPIILYSAFNEQEEARFIAARIEDWVQQGNSYDDIAILYRSNAQS 360
             R+GK LWT+G  GEPI LY AFNE +EARF+  RI+ W   G +  + AILYRSNAQS
Sbjct: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360

Query: 361 RILEDAMLQKGIPYRIYGGLRFFERAEIKDTLAYMRLMANRDDDTSFERVVNQPARGLGE 420
           R+LE+A+LQ  +PYRIYGG+RFFER EIKD L+Y+RL+ANR+DD +FERVVN P RG+G+
Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420

Query: 421 KSVDMIRMQARQDETSLWQAASKMVVEQLLPPRAKNALGGFLHLINELETSTAELDLWEQ 480
           +++D++R  +R  + +LWQA  +++ E+ L  RA +AL  F+ LI+ L   TA++ L  Q
Sbjct: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480

Query: 481 TDIVIEHSGLLDMYSKEKGEKGQARKENLQELVNATREFDPDEAIPDETPDMTPLQAFIA 540
           TD VI+ SGL  MY +EKGEKGQ R ENL+ELV ATR+F  +E    E  D+ PLQAF++
Sbjct: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE----EDEDLMPLQAFLS 536

Query: 541 HATLEAGETQADEYQESVQMMTLHSAKGLEFPLVFIAGVEEKLFPHQMSLDEPGGLEEER 600
           HA LEAGE QAD +Q++VQ+MTLHSAKGLEFP VFI G+EE +FP QMSLDE G LEEER
Sbjct: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596

Query: 601 RLAYVGITRAMKQLYLTFAEKRRIFGRETYPQQSRFIREIPDELLTEVRLNTRVQRPVFN 660
           RLAYVG+TRAM++L LT+AE RR++G+E Y + SRFI E+P+E + EVRL   V RPV +
Sbjct: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656

Query: 661 RSPKSPIQRKGPEGFYLGQLVKHPKFGKGIIINYEGEGPQASVQINFEKEGLKKLMLAYA 720
           +   +P+  +   G+ LGQ V+H KFG+G I+N EG G  + +Q+ F+ +G+K L+ AYA
Sbjct: 657 QRMGTPMV-ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715

Query: 721 KLEPV 725
           +LE V
Sbjct: 716 RLESV 720