Pairwise Alignments

Query, 312 a.a., HTH-type transcriptional regulator MetR from Erwinia amylovora T8

Subject, 305 a.a., DNA-binding transcriptional regulator, homocysteine-binding from Pseudomonas putida KT2440

 Score =  265 bits (678), Expect = 8e-76
 Identities = 134/291 (46%), Positives = 195/291 (67%), Gaps = 5/291 (1%)

Query: 1   MIELKHLRTLQALQNTGSLAAAAAQLHQTQSALSHQFSDLEQRLGFRLFVRKSQPLRFTP 60
           M+E++HL+TL AL+   SL  AA +LH TQSALSHQF +LE+RLG  +FVRK++P+RFT 
Sbjct: 1   MLEIRHLKTLHALREADSLVEAAERLHLTQSALSHQFKELEERLGLPIFVRKTKPIRFTS 60

Query: 61  QGEVLLQLAEQVLPQIQQALQACHEPHQTT---LRIAIECHSCIQWLTPALNEFRQSWPQ 117
            G  LLQLA+  LP ++ A +        T   L +AIECHSC QWL P +++FR +WP+
Sbjct: 61  AGLRLLQLADATLPLLRSAERDIARLAGGTAGRLHMAIECHSCFQWLMPTIDQFRDAWPE 120

Query: 118 VVMDFKSGVTFDPQPALQQGELDVVLTSDILPRSGLFYSPMFDFEVRLVLAPNHPLAQKT 177
           V +D  SG  F P PAL +G+LD+V+TSD +  +G+ Y P+F +E  L +A  HPLA K 
Sbjct: 121 VELDLASGFAFAPLPALARGDLDLVVTSDPVDLAGITYVPLFTYEAMLAVANQHPLASKP 180

Query: 178 VISPQDLASEVLMIYPVQRQRLDIWRHFLQPAGVSP-ALKSVDNTLLLIQMVSAGMGIAA 236
            I PQDL  + L+ YPV+R RLDI+  FL+PA + P A+++ + T++++Q+V++G G+  
Sbjct: 181 YIVPQDLLDQTLITYPVERDRLDIFTRFLEPADIEPAAVRTSELTVMMMQLVASGRGVCG 240

Query: 237 LPHWVVESFEHQGLVVTKALGD-GLWSRLYAAVRDGEQRQPVIEAFTRSAR 286
           +PHW +  +  +G V  K LG+ GL++ LYAAVR      P +  F  +A+
Sbjct: 241 MPHWALHEYSSRGYVKGKRLGEKGLFATLYAAVRTDMLDAPYMRDFLLTAK 291