Pairwise Alignments

Query, 941 a.a., excinuclease ABC subunit UvrA from Erwinia tracheiphila SCR3

Subject, 944 a.a., excinuclease ABC subunit A from Pseudomonas simiae WCS417

 Score = 1424 bits (3685), Expect = 0.0
 Identities = 699/941 (74%), Positives = 818/941 (86%), Gaps = 1/941 (0%)

Query: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKI +RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG PRC
Sbjct: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC 120

Query: 121 PEHDVTLAAQTVSQMVDNVLALTEGRRLMLLAPIIKERKGEHSKTLENLASQGYIRARID 180
           P+HD+ L AQTVSQMVD VLA  EG +LMLLAP+I+ERKGEH    E L +QG++RARI+
Sbjct: 121 PDHDIPLEAQTVSQMVDLVLAQPEGAKLMLLAPVIRERKGEHLSVFEELRAQGFVRARIN 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLQQRLAESFETALELSGGTVVVADMDDT 240
           G++ +L + PKL+ QKKH+I+VVVDRFKVR DLQQRLAESFETAL+L+ G  +VA MDD 
Sbjct: 181 GKLYELDEAPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240

Query: 241 SAEELVFSANFACPVCGYSMSELEPRLFSFNNPAGACATCDGLGVQQYFDPERVVQNPDL 300
             EE++FSA FACP+CG+++SELEP+LFSFNNPAGAC TCDGLGV+Q+FD +R+V N D+
Sbjct: 241 PGEEIIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLV-NGDM 299

Query: 301 SLAGGAIRGWDRRNFYYFQMLCSLSEHLNFDIETPFISLDASTRKVILYGSGKENIEFKY 360
           +LA GAIRGWDRRN YYFQML SL+ H  F +E PF  L A  +KVIL+GSG +N++FKY
Sbjct: 300 TLAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEVPFNQLPADQQKVILHGSGSQNVDFKY 359

Query: 361 INDRGDTSVRRHPFEGVLHNMERRYKETESAAVREDLAKFISNRACASCEGTRLRREARH 420
           +NDRGD   R HPFEG++ N+ERRY+ETESA+VRE+LAKF+S + C  C GTRLRREARH
Sbjct: 360 LNDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQPCPDCRGTRLRREARH 419

Query: 421 VFVENTNLPTISDMSIGHAMTFFQEMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480
           V+V    LP ++++ IG A  +F  +KL+G+R +IA+K+LKEI +RL+FLVNVGL+YLSL
Sbjct: 420 VWVGEKTLPAVTNLPIGDACEYFGVLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSL 479

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRNLGNT 540
            RSA+TLSGGEAQRIRLASQIGAGLVGV+Y+LDEPSIGLHQRDN+RLL TL HLR++GNT
Sbjct: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNT 539

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVRGGQVVAEGTVDDIMAVDASLTGQFLSGKRSIAV 600
           VIVVEHDEDAIR AD+V+DIGPGAGV GG +VAEGT  ++MA   SLTG++LSG+  I V
Sbjct: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEV 599

Query: 601 PQERVKAAPNKVLKLTGAKGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLFPIAQR 660
           P +R        L L GA+GNNL++V L +P+GL +C+TGVSGSGKSTLIN+TLFP++  
Sbjct: 600 PAKRTPRNKKLALHLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSAT 659

Query: 661 LLNGATIIEPAPYRDISGMEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFSGVPE 720
            LNGAT +E A +  I G+EH DKV+DIDQSPIGRTPRSNPATYTG+FTP+RELF+GVPE
Sbjct: 660 ALNGATTLEAAAHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 719

Query: 721 SRTRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SR+RGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPDIYVPCD CK KRYNRETLEIKY
Sbjct: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779

Query: 781 KGKSIHEVLEMTIEEAREFFDAVPALARKLQTMMDVGLSYIRLGQSATTLSGGEAQRVKL 840
           KGKSIHE LEMTIEEAR FFDAVPALARKLQT+MDVGLSYI+LGQSATTLSGGEAQRVKL
Sbjct: 780 KGKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900
           +RELSKR TG+TLYILDEPTTGLHFADIQQLL+VLH+LRD GNT+VVIEHNLDVIKTADW
Sbjct: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899

Query: 901 IVDLGPEGGSGGGEILASGTPETVAKCKASHTARFLKPLLK 941
           +VDLGPEGGS GG+I+A GTPE V++   SHT  +LKPLL+
Sbjct: 900 LVDLGPEGGSKGGQIIAVGTPEQVSEMPQSHTGYYLKPLLE 940