Pairwise Alignments

Query, 941 a.a., excinuclease ABC subunit UvrA from Erwinia tracheiphila SCR3

Subject, 940 a.a., excinuclease ABC subunit UvrA from Escherichia coli ECRC98

 Score = 1717 bits (4446), Expect = 0.0
 Identities = 852/940 (90%), Positives = 901/940 (95%)

Query: 1   MDKIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           MDKIEVRGARTHNLKNINL+IPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLL+ARVGEPRC
Sbjct: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC 120

Query: 121 PEHDVTLAAQTVSQMVDNVLALTEGRRLMLLAPIIKERKGEHSKTLENLASQGYIRARID 180
           P+HDV LAAQTVSQMVDNVL+  EG+RLMLLAPIIKERKGEH+KTLENLASQGYIRARID
Sbjct: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLQQRLAESFETALELSGGTVVVADMDDT 240
           GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDL QRLAESFETALELSGGT VVADMDD 
Sbjct: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240

Query: 241 SAEELVFSANFACPVCGYSMSELEPRLFSFNNPAGACATCDGLGVQQYFDPERVVQNPDL 300
            AEEL+FSANFACP+CGYSM ELEPRLFSFNNPAGAC TCDGLGVQQYFDP+RV+QNP+L
Sbjct: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300

Query: 301 SLAGGAIRGWDRRNFYYFQMLCSLSEHLNFDIETPFISLDASTRKVILYGSGKENIEFKY 360
           SLAGGAIRGWDRRNFYYFQML SL++H  FD+E P+ SL A+  KV+LYGSGKENIEFKY
Sbjct: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360

Query: 361 INDRGDTSVRRHPFEGVLHNMERRYKETESAAVREDLAKFISNRACASCEGTRLRREARH 420
           +NDRGDTS+RRHPFEGVLHNMERRYKETES+AVRE+LAKFISNR CASCEGTRLRREARH
Sbjct: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420

Query: 421 VFVENTNLPTISDMSIGHAMTFFQEMKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLSL 480
           V+VENT LP ISDMSIGHAM FF  +KL+GQRAKIAEK+LKEIGDRLKFLVNVGLNYL+L
Sbjct: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLETLVHLRNLGNT 540
           SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLL TL+HLR+LGNT
Sbjct: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVRGGQVVAEGTVDDIMAVDASLTGQFLSGKRSIAV 600
           VIVVEHDEDAIRAADHVIDIGPGAGV GG+VVAEG ++ IMAV  SLTGQ++SGKR I V
Sbjct: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600

Query: 601 PQERVKAAPNKVLKLTGAKGNNLKDVTLTLPVGLFSCITGVSGSGKSTLINDTLFPIAQR 660
           P++RV A P KVLKLTGA+GNNLKDVTLTLPVGLF+CITGVSGSGKSTLINDTLFPIAQR
Sbjct: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660

Query: 661 LLNGATIIEPAPYRDISGMEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPVRELFSGVPE 720
            LNGATI EPAPYRDI G+EHFDKVIDIDQSPIGRTPRSNPATYTG+FTPVRELF+GVPE
Sbjct: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720

Query: 721 SRTRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SR RGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
Sbjct: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780

Query: 781 KGKSIHEVLEMTIEEAREFFDAVPALARKLQTMMDVGLSYIRLGQSATTLSGGEAQRVKL 840
           KGK+IHEVL+MTIEEAREFFDAVPALARKLQT+MDVGL+YIRLGQSATTLSGGEAQRVKL
Sbjct: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLEVLHQLRDQGNTIVVIEHNLDVIKTADW 900
           ARELSKRGTGQTLYILDEPTTGLHFADIQQLL+VLH+LRDQGNTIVVIEHNLDVIKTADW
Sbjct: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900

Query: 901 IVDLGPEGGSGGGEILASGTPETVAKCKASHTARFLKPLL 940
           IVDLGPEGGSGGGEIL SGTPETVA+C+ASHTARFLKP+L
Sbjct: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940