Pairwise Alignments

Query, 242 a.a., two-component system response regulator BtsR from Erwinia tracheiphila SCR3

Subject, 239 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  344 bits (883), Expect = e-100
 Identities = 175/238 (73%), Positives = 202/238 (84%), Gaps = 2/238 (0%)

Query: 1   MLRVVIVDDEPLARANLRLMLMEEPDITIVSECVNAIEAIGAVHRLKPDVLFLDIQMPRI 60
           M++V+IVDDEPLAR NLR+ L E+ DI IV EC NA+E IGAVH+L+PDVLFLDIQMPRI
Sbjct: 1   MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVHKLRPDVLFLDIQMPRI 60

Query: 61  NGLEMVSMLDDSHRPFIVFLTAFEEYALKAFEEHAFDYLLKPVASARLGKTLMRLRQQR- 119
           +GLEMV MLD  HRP+IVFLTAF+EYA+KAFEEHAFDYLLKP+  ARL KTL RLRQ+R 
Sbjct: 61  SGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIDEARLEKTLARLRQERS 120

Query: 120 -QVLPAPQEHPQPLQFIPCSGHSRIYLLQIHDVAFVSCRMSGVYVTDNQGKEGLTELTLR 178
            Q +    E+ Q L+FIPC+GHSRIYLLQ+ DVAFVS RMSGVYVT ++GKEG TELTLR
Sbjct: 121 KQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRMSGVYVTSHEGKEGFTELTLR 180

Query: 179 TIENRTTFLRCHRQYLVNMAQLKEICLQDNGQAELKLRCGLTVPVSRRYLKPLKKAWG 236
           T+E+RT  LRCHRQYLVN+A L+EI L+DNGQAEL LR GLTVPVSRRYLK LK+A G
Sbjct: 181 TLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIG 238