Pairwise Alignments

Query, 355 a.a., recombinase RecA from Erwinia tracheiphila SCR3

Subject, 371 a.a., recombinase RecA from Variovorax sp. OAS795

 Score =  469 bits (1207), Expect = e-137
 Identities = 235/356 (66%), Positives = 294/356 (82%), Gaps = 6/356 (1%)

Query: 4   DENKQKALAAALGQIEKQFGKGSIMRLGEDRTM-DVETISTGSLSLDIALGAGGLPMGRI 62
           +  K KAL AAL QIEKQFGKG+IMRLGE   + D++ +STGSL LDIALG GGLP GR+
Sbjct: 14  NSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRV 73

Query: 63  VEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
           +EIYGPESSGKTTLTLQVIAA Q++  TCAF+DAEHALD  YA+KLGV++ +LL SQPDT
Sbjct: 74  IEIYGPESSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDT 133

Query: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D+L RSGAVD+I++DSVAALTPKAEIEGE+GDS  GL AR+MSQA+RKL   
Sbjct: 134 GEQALEIVDSLVRSGAVDLIVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTAT 193

Query: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
           +K++N ++IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRIG IK+GDE +G+E
Sbjct: 194 IKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTIKKGDEAIGNE 253

Query: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINVLGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
           T+VKVVKNKV+ PFK AEF I++GEGI+  GE++D+GV  K+++K+GAWY+YNG+KIGQG
Sbjct: 254 TKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKILDKSGAWYAYNGEKIGQG 313

Query: 303 KANAGNFLKENPAIASEIESKLR-----AMLLNNPDSKPDFSADDADSHPISEADE 353
           + NA  FL+ENP ++ EIE+K+R      +L  + D+ P+ +   A +    +AD+
Sbjct: 314 RDNAREFLRENPELSREIENKVRESLGIPLLAADADATPEKAEKPAKASKAEKADK 369