Pairwise Alignments

Query, 355 a.a., recombinase RecA from Erwinia tracheiphila SCR3

Subject, 348 a.a., DNA recombination/repair protein RecA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  434 bits (1115), Expect = e-126
 Identities = 215/344 (62%), Positives = 269/344 (78%), Gaps = 2/344 (0%)

Query: 1   MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRTMDVETISTGSLSLDIALGAGGLPMG 60
           M++   K KAL   + +++K +GKG++M+L +++  D+  ISTGSL LDIALG GGLP G
Sbjct: 1   MSVSNEKLKALQLTMDKLDKTYGKGTVMKLSDNKVEDIPAISTGSLGLDIALGIGGLPRG 60

Query: 61  RIVEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQP 120
           R+VEIYGPESSGKTTLT+  IA AQRKG   AFIDAEHA D VYA+KLG+D +NLL SQP
Sbjct: 61  RVVEIYGPESSGKTTLTMHCIAEAQRKGGLAAFIDAEHAFDRVYAQKLGIDTENLLISQP 120

Query: 121 DTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA 180
           D GEQALEI D L RSGA+D+I++DSVAAL PK E+EG++GDS MGL AR+MSQA+RKL 
Sbjct: 121 DNGEQALEIADHLIRSGAIDIIVIDSVAALVPKGELEGDMGDSKMGLQARLMSQALRKLT 180

Query: 181 GNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKE-GDEVV 239
           G + ++    IFINQ+R KIGVMFGNPETTTGGNALKFYASVRLDIRRIG IKE  D + 
Sbjct: 181 GTINKTGCTCIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRIGQIKESADNIT 240

Query: 240 GSETRVKVVKNKVAAPFKQAEFQIMYGEGINVLGELVDLGVKHKLIEKAGAWYSYNGDKI 299
           G+ TRVKVVKNKVA PFK  EF IMYGEGI+ +GE++DLGV+  +++K+G+W+SYNGDK+
Sbjct: 241 GNRTRVKVVKNKVAPPFKVVEFDIMYGEGISKVGEVLDLGVELGIVQKSGSWFSYNGDKL 300

Query: 300 GQGKANAGNFLKENPAIASEIESKLRAMLLNNPDSKPDFSADDA 343
           GQG+      L +NP +  EIE K+RA++   P+ K   + DDA
Sbjct: 301 GQGRDGVKQILLDNPELMEEIEGKIRAIVKGEPE-KVAAALDDA 343