Pairwise Alignments

Query, 453 a.a., signal recognition particle protein from Erwinia tracheiphila SCR3

Subject, 453 a.a., Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) (NCBI) from Escherichia coli BW25113

 Score =  811 bits (2094), Expect = 0.0
 Identities = 413/453 (91%), Positives = 436/453 (96%)

Query: 1   MFDNLTDRLSQTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFINRVKERAL 60
           MFDNLTDRLS+TLRNISGRGRLTEDN+KDTLREVRMALLEADVALPVVREFINRVKE+A+
Sbjct: 1   MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV 60

Query: 61  GQDVNKSLTPGQEFIKIVQNELVAAMGAENNTLNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           G +VNKSLTPGQEF+KIV+NELVAAMG EN TLNLAAQPPAV+LMAGLQGAGKTTSVGKL
Sbjct: 61  GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL 120

Query: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLEKLAEQVGVDFCPSDLSQQPVYIVKNALQQAK 180
           GKFLREKHKKKVLVVSADVYRPAAIKQLE LAEQVGVDF PSD+ Q+PV IV  AL++AK
Sbjct: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK 180

Query: 181 LKFYDVLLVDTAGRLHVDEAMMDEIKQVHAVINPVETLFVVDAMTGQDAANTAKAFNEAL 240
           LKFYDVLLVDTAGRLHVDEAMMDEIKQVHA INPVETLFVVDAMTGQDAANTAKAFNEAL
Sbjct: 181 LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITDRPIKFMGVGEKTDALEPFYPDRIASRILGMGDV 300
           PLTGV+LTKVDGDARGGAALSIRHIT +PIKF+GVGEKT+ALEPF+PDRIASRILGMGDV
Sbjct: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV 300

Query: 301 LSLIEDIESKVDRVQAEKLASKLKKGDGFDLNDFLQQLKQMRNMGGMASLMGKLPGMGQL 360
           LSLIEDIESKVDR QAEKLASKLKKGDGFDLNDFL+QL+QM+NMGGMASLMGKLPGMGQ+
Sbjct: 301 LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI 360

Query: 361 PDNVKSQMDDKVLVRMEAMINSMTRKEREKPEIIKGSRKRRVATGSGMQVQDVNRLLKQF 420
           PDNVKSQMDDKVLVRMEA+INSMT KER KPEIIKGSRKRR+A G GMQVQDVNRLLKQF
Sbjct: 361 PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF 420

Query: 421 DDMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR 453
           DDMQRMMKKMKKGGMAKMMR MKGMMPPGFPGR
Sbjct: 421 DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR 453