Pairwise Alignments

Query, 241 a.a., ABC transporter permease from Erwinia tracheiphila SCR3

Subject, 264 a.a., ABC-2 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 9   RYKRSRLGPFWITISMAVMITTMGMVFANLFKTPL------HDFLPYLTLGLVIWGFLSG 62
           R+ RSRLG  W+ I+    +    +V +N+    L      + +  YL  G++ W + S 
Sbjct: 26  RFSRSRLGGLWMIINPLAQVAIYALVLSNVLAAKLPGIDNKYAYAVYLMAGMLAWSYFSE 85

Query: 63  CITEGCDALISAEGIIKQLPVP---LHVHVLRVVWKNFIIFMHNIVIFPLVLFAVSKGIN 119
            I       I    ++K++  P   L V V      N+++    I+   LV  A+ +  +
Sbjct: 86  IIGRCLTLFIDQGNLMKKMRFPRITLPVIVAGSCLLNYVLLFAAIL---LVFAALGQWPH 142

Query: 120 WNVLLVVPGFVILALNVSWLLMVLALICARFRDMTQIIMSLMQVVFYLTPIIWMPQLLTH 179
           W +L ++P  +++      L ++L ++    RD+ Q+I  L+QV F+ TPI++   ++  
Sbjct: 143 WQMLWLIPLTIVITALAVGLGLILGVLNVFIRDVGQVIPILLQVWFWFTPIVYPLNIIPE 202

Query: 180 RVGATLLNFNPFYHLMDVVRAPLL-GQIPSVTTYCVTVIMA 219
           +   +++  NP + ++      L+  + P + +  V  ++A
Sbjct: 203 QF-KSVMGINPMFPIVSAYHDVLVYARAPDLQSMAVIAVVA 242