Pairwise Alignments

Query, 520 a.a., carbohydrate porin from Erwinia tracheiphila SCR3

Subject, 446 a.a., maltoporin LamB from Escherichia coli ECOR38

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 116/455 (25%), Positives = 186/455 (40%), Gaps = 80/455 (17%)

Query: 111 EFHGYARSGLLMNSSAAKTQGGPTMTPAGETGGHVGRLGNEPDTYVEMNLEHKQTLANGA 170
           +FHGYARSG+    S  + Q   T     +      RLGNE +TY E+ L  +       
Sbjct: 27  DFHGYARSGIGWTGSGGEQQCFQTTGAQSKY-----RLGNECETYAELKLGQEVWKEGDK 81

Query: 171 TTRFKVMMADGQRTYNDWTSNTSSLNVRQAFVELGHLPTFTDGFKDATVWAGKRFDRDNF 230
           +  F   +A      NDW +   +   R+A V+  +L  +  G   +T+WAGKRF + + 
Sbjct: 82  SFYFDTNVAYSVAQQNDWEATDPAF--REANVQGKNLIEWLPG---STIWAGKRFYQRH- 135

Query: 231 DIHWLDSDVVFLAGTGAGVYDMRWGEQGHSNLSLYGRTFGDIENSENTAQNYIL-----T 285
           D+H +D     ++G GAG+ ++   + G   LSL      +   S + A N I      T
Sbjct: 136 DVHMIDFYYWDISGPGAGLENI---DVGFGKLSLAATRSSEAGGSSSFASNNIYDYTNET 192

Query: 286 SNNFY------------GPLQFMVSGMRA--KDNDDRLDTEGNKVKSDAANEGVHALVGL 331
           +N+ +            G L+  V   RA  +DN   +D          A      L G 
Sbjct: 193 ANDVFDVRLAQMEINPGGTLELGVDYGRANLRDNYRLVDGASKDGWLFTAEHTQSVLKGF 252

Query: 332 HN-------DSFYGLREGLSKTALLYGHGLGAEVK----NVGSDGALLSQADTWRLATYG 380
           +        DS     +GLS+     G G+  + +    N+ ++G +L      R+  +G
Sbjct: 253 NKFVVQYATDSMTSQGKGLSQ-----GSGVAFDNEKFAYNINNNGHML------RILDHG 301

Query: 381 ITPLGGGWHLAPALLAQTSRNRYAKGDSYQWATANLRVIQEINQNFEMQYEGSYQYMDLR 440
              +G  W +    + Q     +   +  +W T  +R + +         E  Y  ++ +
Sbjct: 302 AISMGDNWDMMYVGMYQDIN--WDNDNGTKWWTVGIRPMYKWTPIMSTVMEIGYDNVESQ 359

Query: 441 PEGYNNRNAVSGGFYKLTVAPTLKAGDVGDFLKRPEIRLFASWMDWDHHLD-NYAGSDAF 499
             G  N        YK+T+A   +AGD      RP IR+FA++  WD     +Y G+   
Sbjct: 360 RTGDKNNQ------YKITLAQQWQAGD--SIWSRPAIRVFATYAKWDEKWGYDYTGNANT 411

Query: 500 GSDGFKA------GG--------EWNFGVQMETWF 520
            ++  KA      GG        EW FG QME W+
Sbjct: 412 NTNFGKAVPADFNGGSFGRGDSDEWTFGAQMEIWW 446