Pairwise Alignments

Query, 302 a.a., sugar ABC transporter permease from Erwinia tracheiphila SCR3

Subject, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  159 bits (402), Expect = 7e-44
 Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 7/273 (2%)

Query: 12  AWVLLAPMLLMMGLLTTWPLLRTIRLSFTDAALISNGGTINYIGVENYLYALTDPDFLSS 71
           A +LLAP LL++G L  WP++  I +SF    L  N  +  ++GV NY+  L+DP F  S
Sbjct: 14  ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIES-TFVGVSNYVRILSDPGFWHS 72

Query: 72  LLRTLYFTVTSVALEGIIGVLVALLLNQKFYGRSVLRVLVILPWALPTIVNAMMWRLNFN 131
           L  T+++T   VA   ++G+ VA+  N++F  R   R LVIL +  P+I     W+  FN
Sbjct: 73  LWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFN 132

Query: 132 PDYGSINAL-LTQLGIIGNYRSWLGSPDSALNAVMVADVWKNYPLVTLLVLAALQSIPDH 190
             YG +N L +  L +      W  +P S+   V++  +W+ +P   +  LA LQ+I   
Sbjct: 133 NGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKS 192

Query: 191 LFEAAMLDGASALHRFRAIIFPAIVGPLSVALVLRTIDAFKVFDVIYVMTRGGPVDSTKT 250
           L+EAA +DGA+A  RFR +  PAI+  L+  + LRTI  F +F  +Y++T          
Sbjct: 193 LYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT-----TKVDI 247

Query: 251 LSFYVYQESFSYLRAGSGAAYAILMTLMCSVLI 283
           L  Y+Y+ +F++   G  AA ++++ ++   +I
Sbjct: 248 LGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVI 280