Pairwise Alignments

Query, 163 a.a., transcription elongation factor/antiterminator RfaH from Enterobacter asburiae PDN3

Subject, 162 a.a., transcriptional activator RfaH (NCBI) from Escherichia coli BW25113

 Score =  277 bits (708), Expect = 7e-80
 Identities = 134/163 (82%), Positives = 147/163 (90%), Gaps = 1/163 (0%)

Query: 1   MQAWYLLYCKRGQLQRAQEHLERQSVNCLTPVITLEKMQRGKRTTVSEPLFPNYLFVEFD 60
           MQ+WYLLYCKRGQLQRAQEHLERQ+VNCL P+ITLEK+ RGKRT VSEPLFPNYLFVEFD
Sbjct: 1   MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFD 60

Query: 61  PEVIHTTTISATRGVSHFVRFGAHPATVPSTVIHQLSIYQQPEGITDPETPYSGDSVVIT 120
           PEVIHTTTI+ATRGVSHFVRFGA PA VPS VIHQLS+Y +P+ I DP TPY GD V+IT
Sbjct: 61  PEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVY-KPKDIVDPATPYPGDKVIIT 119

Query: 121 EGAFEGLQAIFAEPDGEARSMLLLNLLNKQVLQSVKNTDFRKL 163
           EGAFEG QAIF EPDGEARSMLLLNL+NK++  SVKNT+FRKL
Sbjct: 120 EGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL 162