Pairwise Alignments

Query, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Enterobacter asburiae PDN3

Subject, 915 a.a., DNA polymerase I, 5 from Pseudomonas putida KT2440

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 578/927 (62%), Positives = 695/927 (74%), Gaps = 20/927 (2%)

Query: 8   PLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAVVFDAKGK 67
           PL+LVDGSSYLYRA+HA PPLT S G PTGA+ GVLNML+SL  QY  +  AVVFDAKG 
Sbjct: 5   PLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFDAKGG 64

Query: 68  TFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEADDVIGTLAREAEK 127
           TFRD +F  YK++RP MPDDLR QIEPLH  VKA+G PLL V GVEADDVIGTLAR +  
Sbjct: 65  TFRDAMFAEYKANRPSMPDDLRVQIEPLHASVKALGYPLLCVEGVEADDVIGTLARSSAA 124

Query: 128 MGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFLALMGDSS 187
           +GRPV+ISTGDKDMAQLV   ITL+NTMT ++L    V  K+GV PE IIDFLALMGD  
Sbjct: 125 LGRPVIISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALMGDKV 184

Query: 188 DNIPGVPGVGEKTAQALLQGLGG-LDTLYAESDKIAGLSFRGAKTMAGKLEENKEVAYLS 246
           DNIPGVPGVGEKTA  LL G+GG L  LYA  DK+  L+ RGAKT+  KLEE+++ A+LS
Sbjct: 185 DNIPGVPGVGEKTAVGLLTGIGGGLSDLYANLDKVPALAIRGAKTLPAKLEEHRDAAFLS 244

Query: 247 YKLATIKTDVELELGCEQLEVQQPSADDLLSLFKKYEFKRWITDVEAGKWLQAKGAKPAA 306
           Y+LATIK DV L++  E L   +P  + LL+L+ + EFK W+ +++          + AA
Sbjct: 245 YELATIKVDVPLDVEVEALVCGEPDREALLALYTEMEFKSWVAELQ----------RDAA 294

Query: 307 KPKETIVVDAEEQAEEEAVALSFDNYETILEESQLIAWIEKLKKAPVFAFDTETDSLDNI 366
           K  + +    E   + EA       YETIL++++  AW+EKL++AP+FAFDTET  LD  
Sbjct: 295 KAGDDVAPAVEPAVKVEA------KYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQ 348

Query: 367 SANMVGLSFATEPGIAAYVPVAHDYLDAPEQISRERVLELLKPILEDEKALKVGQNLKYD 426
            A +VGLSFA EP  AAYVP+AHDY  AP Q+ RE VL  LKP+LED    KVGQN KYD
Sbjct: 349 QAQLVGLSFAVEPHEAAYVPLAHDYEGAPVQLDREAVLLALKPLLEDPAKAKVGQNAKYD 408

Query: 427 RGILQNYG--IELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEEIAGKGKN 484
             IL N    IE+RG+A+DTMLESY+L+S A RHDMDSL+ ++L H TI FE+IAGKG  
Sbjct: 409 INILANGSPAIEMRGVAYDTMLESYVLNSTATRHDMDSLAQKYLDHTTIAFEDIAGKGAK 468

Query: 485 QLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKHEGPLNVFQHIEMPLVPVLSRIER 544
           QLTFNQI L++AG YAAEDAD+TL+LH  +  +L +      V   IEMPLVPVL+RIER
Sbjct: 469 QLTFNQINLDKAGPYAAEDADITLRLHHALQARLAQTPSVQPVLMDIEMPLVPVLARIER 528

Query: 545 NGVKIDPTVLHNHSGELAQRLTELEQKAHELAGEPFNLSSPKQLQTILFEKQGIKPLKKT 604
            G  +D  +L   SGEL  ++ ELE +A+ELAGE FNL SPKQL TIL++K G+  L KT
Sbjct: 529 QGALVDAELLKVQSGELGVKMAELELRAYELAGETFNLGSPKQLGTILYDKLGMPVLSKT 588

Query: 605 PGGAPSTSEEVLEELALD-YPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQ 663
             G PST+E VL+ELAL  YPLP+V++QYR L+KLKSTYTDKLP  INP+TGR+HTSY Q
Sbjct: 589 AKGQPSTAEAVLDELALQGYPLPEVLMQYRSLSKLKSTYTDKLPGQINPRTGRIHTSYQQ 648

Query: 664 AVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRDK 723
           AVAATGRLSS+DPNLQNIP+R  EGRRIRQAFIA   Y +++ADYSQIELRIMAHL++D+
Sbjct: 649 AVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFIASPGYKLLAADYSQIELRIMAHLAKDE 708

Query: 724 GLLTAFAEGKDIHRATAAEVFGLPLDSVTNEQRRSAKAINFGLIYGMSAFGLSRQLNIPR 783
           GLL AF    D+HRATAAEVFG+ L+ VT +QRRSAKAINFGLIYGMSAFGL++Q+ + R
Sbjct: 709 GLLHAFRNDLDVHRATAAEVFGVALEDVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDR 768

Query: 784 KESQKYMDLYFERYPGVLEYMERTRAQAKEKGYVETLDGRRLYLPDIKSSNAARRAGAER 843
           K+SQ Y+D YF RYPGVL YMERTRAQA E+G+VETL GRRLYLPDI + N A R GAER
Sbjct: 769 KQSQDYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAER 828

Query: 844 AAINAPMQGTAADIIKRAMIAVDAWLEEEKPRVKMIMQVHDELVFEVHKDDLDAVSKKIH 903
            AINAPMQGTAADIIKRAM+ VD WL E     ++I+QVHDELV EV +D +  V  +I 
Sbjct: 829 TAINAPMQGTAADIIKRAMVKVDNWLSESGLDARVILQVHDELVLEVREDLVQQVKDEIR 888

Query: 904 ELMESSMTLDVPLLVEVGSGENWDQAH 930
           + M  +  LDVPLLVE G G NWD+AH
Sbjct: 889 QHMSQAAQLDVPLLVEAGVGANWDEAH 915