Pairwise Alignments

Query, 224 a.a., Sel1 repeat from Enterobacter asburiae PDN3

Subject, 331 a.a., TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)

Query: 25  KEQAEAGDARAQYYLA----DTYFSSGDSKQAALWAEKAAKGGDVDAMGLLSQILFTQG- 79
           ++ AE G   AQY+L     DT     D+  A  W+EKAA+ G   A   L  +   +  
Sbjct: 56  QQAAEQGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETG 115

Query: 80  ---NYAQAKALAQQATIAGSKRGAIMLARVLVNTQAGKTDYPQAIKLLQTAAEDIDNDSA 136
              +YAQA A  ++            L R+  +    + +  QA+   + AA  +    A
Sbjct: 116 MAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAA--LQGHCA 173

Query: 137 VDAQMLLGLIYANGVEVAQDDVQAASWFKRSSALSRTGYAEYWAGMLFRQGEKGFITPNK 196
             +Q  L  +Y NG    ++   AA W+K+ SAL  + Y++Y  G  +  G KG I  + 
Sbjct: 174 --SQERLAYMYGNGKGCRKNLSLAALWYKK-SALQESSYSQYQMGYCYYIG-KG-IKQDY 228

Query: 197 QKALYWLNLSCTEGFD 212
           Q+A+YW   +  +G D
Sbjct: 229 QQAIYWFRKAADQGDD 244



 Score = 32.0 bits (71), Expect = 1e-05
 Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 40/184 (21%)

Query: 24  YKEQAEAGDARAQYYLADTYFSSG----DSKQAALWAEKAAKGGDVDAMGLLSQILFT-- 77
           Y++ AE     AQY L   Y S      +  QA  W ++AA  G   +   L+ +     
Sbjct: 127 YRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGK 186

Query: 78  --QGNYAQAKALAQQATIAGSKRGAIMLARVLVNTQAGKTDYPQAIKLLQTAAEDIDNDS 135
             + N + A    +++ +  S      +       +  K DY QAI   + AA+  D+D+
Sbjct: 187 GCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAADQGDDDA 246

Query: 136 AVDAQML--------------------------------LGLIYANGVEVAQDDVQAASW 163
                 +                                LG +Y +G   AQD  QA  W
Sbjct: 247 YNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYW 306

Query: 164 FKRS 167
           FK++
Sbjct: 307 FKKA 310