Pairwise Alignments

Query, 327 a.a., transcriptional regulator, LacI family from Enterobacter asburiae PDN3

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  585 bits (1507), Expect = e-172
 Identities = 289/326 (88%), Positives = 309/326 (94%)

Query: 1   MKDVARMAGVSTSTVSHVINNDRFVSEAIREKVEAAVKELNYAPSALARSLKLNQTRTIG 60
           MKDVAR+AGVSTSTVSHVIN DRFVSEAI  KVEAA+KELNYAPSALARSLKLNQT TIG
Sbjct: 4   MKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHTIG 63

Query: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120
           MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC
Sbjct: 64  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 123

Query: 121 TETHQPSKEIIQRYPSIPTVMMDWAPFDGTSDLIQDNSLLGGDMATQHLIDKGHTRIACI 180
           TETHQPS+EI+QRYP++PTVMMDWAPFDG SDLIQDNSLLGGD+ATQ+LIDKGHTRIACI
Sbjct: 124 TETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTRIACI 183

Query: 181 TGPLDKTPARLRLEGYLSAMERAGLAIPDGYRITGDFEFNGGFEAMQKLLAQKPRPQAVF 240
           TGPLDKTPARLRLEGY +AM+RAGL IPDGY +TGDFEFNGGF+AM++LL+   RPQAVF
Sbjct: 184 TGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRPQAVF 243

Query: 241 IGNDAMAFGAYQALYQAGLRVPDDMAVIGYDDIELASYMTPPLTTIHQPKDELGELAIDV 300
            GNDAMA G YQALYQA L+VP D+AVIGYDDIELAS+MTPPLTTIHQPKDELGELAIDV
Sbjct: 244 TGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGELAIDV 303

Query: 301 LIHRMAQPTLQQQRLQLTPVLMERGS 326
           LIHR+ QPTLQQQRLQLTP+LMERGS
Sbjct: 304 LIHRITQPTLQQQRLQLTPILMERGS 329