Pairwise Alignments

Query, 785 a.a., DNA polymerase elongation subunit (family B) from Enterobacter asburiae PDN3

Subject, 786 a.a., DNA polymerase II from Pseudomonas sp. S08-1

 Score = 1068 bits (2763), Expect = 0.0
 Identities = 521/784 (66%), Positives = 626/784 (79%), Gaps = 4/784 (0%)

Query: 5   QEGFLLTRHWRDTPQGTEVAFWLATDSGPLHVTLPPQESVAFIPEAHVEKVKQLLRGENG 64
           Q+GF+LTRHWRDTP GTEV FWLA+D+GP  V L PQ SVAFIPE   E+ +  LRGE  
Sbjct: 4   QQGFVLTRHWRDTPAGTEVEFWLASDAGPRRVRLAPQPSVAFIPEVQRERAEAQLRGERD 63

Query: 65  WRITPLELKDFHRQPVYGLYCRAHRQLMRYEKLLREAGVTLYEADIRPPERFLMERFITA 124
             + PL L+DF ++P+ GLYCR+HRQL++ +K LR+AGV +YEADIRPPERFLMERFITA
Sbjct: 64  VELRPLGLRDFRQRPMLGLYCRSHRQLIKLDKQLRKAGVDVYEADIRPPERFLMERFITA 123

Query: 125 PVWVDGIE-QNGGVVNARLKPNPHYRPPLKWVSLDIETTRHGELYCIGLEGCGDRVVYML 183
           PV   G   ++G +++ARLKP+  YRP L+  SLDIET+  GELY I +EGCG R VYML
Sbjct: 124 PVSFGGTPGEDGTLLDARLKPDDSYRPTLRLASLDIETSERGELYSIAIEGCGQRQVYML 183

Query: 184 GPPNGDASALDFRLEYVNSRPQLLDKLNQWFADYDPDVLIGWNVVQFDLRVLQKHAERYR 243
           G     A  +DF LEY +SR +LL +LN W A++DPD +IGWN+VQFDLRVLQ+HA   +
Sbjct: 184 GARPEVAPEVDFDLEYCSSRAELLQRLNGWLAEHDPDAIIGWNLVQFDLRVLQRHAAELQ 243

Query: 244 IPLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFSLEAVAQELL 303
           +PL+ GRG   +EWREH   N  +FA A GRLIIDGIEAL+SA W+F SFSLE VAQ LL
Sbjct: 244 VPLLFGRGGEPMEWREHASHNH-YFAAAAGRLIIDGIEALRSATWSFPSFSLENVAQTLL 302

Query: 304 GEGKSIDNPWDRMDEIDRRFNEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVNGL 363
           GEGK+ID P+ RMDEI+R F ED+PALA YNLKDCELVT+IF  T ++ FLLERA   GL
Sbjct: 303 GEGKAIDTPYQRMDEINRMFAEDQPALARYNLKDCELVTRIFAHTRLIDFLLERAATTGL 362

Query: 364 AVDRHGGSVAAFSHLYFPRMHRAGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYK 423
             DR GGSVAAF+HLY P MHR G+VAPNLG+  PQASPGG+VMDSRPGLY+SVLVLDYK
Sbjct: 363 PADRSGGSVAAFTHLYLPAMHRMGFVAPNLGEKMPQASPGGFVMDSRPGLYESVLVLDYK 422

Query: 424 SLYPSIIRTFLIDPVGLVEGMAQPDDEHSTEGFLGARFSREKHCLPEIVGNIWHGRDEAK 483
           SLYPSIIRTFLIDPVGL+EG+ +PDDEHS EGF GARFSR +HCLP IV  +W GR+ AK
Sbjct: 423 SLYPSIIRTFLIDPVGLIEGLREPDDEHSVEGFRGARFSRTRHCLPAIVERVWQGREAAK 482

Query: 484 RHGNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHEIMRQTKALIESRGYDV 543
           R GN PLSQALKIIMNAFYGVLG+S CRFFD RLASSIT+RGH IM++T+ LIE+ GY V
Sbjct: 483 REGNAPLSQALKIIMNAFYGVLGSSGCRFFDTRLASSITLRGHAIMKRTRELIEAEGYRV 542

Query: 544 IYGDTDSTFVWLKGAHSEDDAARIGNDLVAFVNDWWQEHLQKER-LTSALELEFETHFAR 602
           IYGDTDSTFVWL   H+E+DAARIG  LVA VN WW+EHL++E  L SALEL++E+H+ R
Sbjct: 543 IYGDTDSTFVWLGHEHAEEDAARIGRALVARVNQWWREHLREEMGLESALELQYESHYRR 602

Query: 603 FLMPTIRGTDQGSKKRYAGLIQEGD-AQRMVFKGLETVRTDWTPLAQQFQQTLYLRVFRN 661
           FLMPT+RG ++GSKKRYAGL++  D ++ MVFKGLETVRTDW+PLAQ+FQQ LY  +F  
Sbjct: 603 FLMPTVRGAEEGSKKRYAGLVRRADGSEEMVFKGLETVRTDWSPLAQRFQQELYRLIFER 662

Query: 662 EPYQDYVRETIASLMAGELDAQLVYRKRLRRPLAEYQRNVPPHVRAARLADEENVRRGRA 721
           +P+QDY+R+ +   +AGELD  L+YRKRLRR L +Y+RNVPPHVRAARLADE N R GR 
Sbjct: 663 KPHQDYIRDYVRRTLAGELDELLIYRKRLRRKLGDYERNVPPHVRAARLADEHNDRLGRP 722

Query: 722 PQYQNRGTIKYVWTISGPEPVDYQHSHLDYEHYLTRQLQPVADGILPFIDDDFATLVTGQ 781
            QYQ  G+I Y+ T++GPEP++ + + +DYEHYLTRQLQP+AD ILPF+ DDF  LV  Q
Sbjct: 723 RQYQRGGSISYLITVAGPEPLETRAAAIDYEHYLTRQLQPIADAILPFVGDDFTRLVNPQ 782

Query: 782 LGLF 785
           LGLF
Sbjct: 783 LGLF 786