Pairwise Alignments

Query, 273 a.a., ribosomal RNA small subunit methyltransferase A from Enterobacter asburiae PDN3

Subject, 270 a.a., ribosomal RNA small subunit methyltransferase A from Pseudomonas simiae WCS417

 Score =  239 bits (609), Expect = 6e-68
 Identities = 125/265 (47%), Positives = 167/265 (63%), Gaps = 1/265 (0%)

Query: 6   HQGHLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVI 65
           H  H ARKRFGQNFL+D  VI+ I+ +I+ +    ++EIGPG  ALT+ +     +L V+
Sbjct: 4   HYQHRARKRFGQNFLHDAGVIDRILRSIHAKPEDRLLEIGPGQGALTQGLLASGGQLDVV 63

Query: 66  ELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFH 125
           ELD+DL   L       P   ++Q DA+  +F  L+      LRV GNLPYNISTPL+FH
Sbjct: 64  ELDKDLIPILNQQFADKPNFNLHQGDALKFDFNTLNAAPNS-LRVVGNLPYNISTPLIFH 122

Query: 126 LFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPP 185
           L +    I DMHFMLQKEVV RL AGP    +GRLS+M QY+C V  +  V P AF PPP
Sbjct: 123 LLNNAGIIRDMHFMLQKEVVERLAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPP 182

Query: 186 KVDSAVVRLVPHKTKPYPVKDLRVLSRITTEAFNQRRKTIRNSLSNSFTVEVLAELGIDP 245
           KVDSA+VRLVPH   P+P KD ++L R+  EAFNQRRKT+RN+L    +   +   G+D 
Sbjct: 183 KVDSAIVRLVPHAVLPHPAKDHKLLERVVREAFNQRRKTLRNTLKALLSNAEIEAAGVDG 242

Query: 246 AMRAENISVEQYCKLANYISDNAPP 270
            +R E + +  + +LA+ ++    P
Sbjct: 243 GLRPEQLDLAAFVRLADQLAIQPAP 267