Pairwise Alignments

Query, 273 a.a., ribosomal RNA small subunit methyltransferase A from Enterobacter asburiae PDN3

Subject, 267 a.a., Ribosomal RNA small subunit methyltransferase A from Pseudomonas putida KT2440

 Score =  245 bits (626), Expect = 6e-70
 Identities = 127/259 (49%), Positives = 172/259 (66%), Gaps = 3/259 (1%)

Query: 9   HLARKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVIELD 68
           H ARKRFGQNFL+D  +I+ I+ AIN + G+ ++EIGPG  ALTE +     +L V+ELD
Sbjct: 7   HRARKRFGQNFLHDAGIIDRILRAINAKAGEHLLEIGPGQGALTEGLLGSGAQLDVVELD 66

Query: 69  RDLAARLQTHPFLG-PKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFHLF 127
           +DL   LQ H F       ++Q DA+  +F +L     + L+V GNLPYNISTPL+FHL 
Sbjct: 67  KDLVPILQ-HKFADRSNFRLHQGDALKFDFNQLGVPP-RSLKVVGNLPYNISTPLIFHLL 124

Query: 128 SYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKV 187
           S+   I DMHFMLQKEVV R+ AGP    +GRLS+M QY+C V  +  V P AF PPPKV
Sbjct: 125 SHAGLIRDMHFMLQKEVVERMAAGPGGGDWGRLSIMVQYHCRVEHLFNVGPGAFNPPPKV 184

Query: 188 DSAVVRLVPHKTKPYPVKDLRVLSRITTEAFNQRRKTIRNSLSNSFTVEVLAELGIDPAM 247
           DSA+VRLVPH+  P+P KD  +L R+  EAFNQRRKT+RN++        +   G+D ++
Sbjct: 185 DSAIVRLVPHEVLPFPAKDHLLLERVVREAFNQRRKTLRNTMKGLLDSAAIEAAGVDGSL 244

Query: 248 RAENISVEQYCKLANYISD 266
           R E + +  + +LA+ ++D
Sbjct: 245 RPEQLDLAAFVRLADQLAD 263