Pairwise Alignments

Query, 335 a.a., Transcriptional regulators from Enterobacter asburiae PDN3

Subject, 330 a.a., DNA-binding transcriptional repressor of ribose metabolism (NCBI) from Escherichia coli BW25113

 Score =  137 bits (345), Expect = 4e-37
 Identities = 102/313 (32%), Positives = 163/313 (52%), Gaps = 14/313 (4%)

Query: 8   TMNDIARAAGVSQATVSLVLNQSRNIKLSDDTRQRVIGVATELGYDRLPAVHAPRNQEEI 67
           TM D+AR AGVS +TVS V+N+ R +  S+    +V     EL Y       + +  +  
Sbjct: 3   TMKDVARLAGVSTSTVSHVINKDRFV--SEAITAKVEAAIKELNYAPSALARSLKLNQTH 60

Query: 68  ALLVSSMQSFDPFIDAISQAREAAW--RNETLLTVYDYGDDIELALNIIRQLEKRNCIGI 125
            + +    S +PF   + +  E +   R  +L+     GD+  +  N+   ++KR   G+
Sbjct: 61  TIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKR-VDGL 119

Query: 126 ILASPVTTLVDMTAFQDCTRIPLVLLNQR--DPGSPLLP--SFIPDDYANAFQVTKHLIA 181
           +L    T        Q    +P V+++    D  S L+   S +  D A     T++LI 
Sbjct: 120 LLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDNSLLGGDLA-----TQYLID 174

Query: 182 CGATRIAHITGESWMEASRQRLAGYQAALQQAGLACEDGLVRQTNWQFSESFTATTSLLA 241
            G TRIA ITG      +R RL GY+AA+++AGL   DG     +++F+  F A   LL+
Sbjct: 175 KGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLS 234

Query: 242 LAERPDAIFCASDWLAIGCYQALAVNGVRIPQDMLLAGYDDQKISEQLTPPLTSIQLPYS 301
              RP A+F  +D +A+G YQAL    +++PQD+ + GYDD +++  +TPPLT+I  P  
Sbjct: 235 HPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKD 294

Query: 302 ELGRLAVEYLCNQ 314
           ELG LA++ L ++
Sbjct: 295 ELGELAIDVLIHR 307