Pairwise Alignments

Query, 321 a.a., putative TIM-barrel protein, nifR3 family from Enterobacter asburiae PDN3

Subject, 328 a.a., tRNA-dihydrouridine synthase B from Azospirillum sp. SherDot2

 Score =  253 bits (647), Expect = 3e-72
 Identities = 135/319 (42%), Positives = 190/319 (59%), Gaps = 2/319 (0%)

Query: 1   MRIGHHQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSSNPQVWESDKSRLRMVH 60
           ++IG   L   +I APM+G++D PFR L    G GL VSEM++S   + E+ +  LRMV 
Sbjct: 3   IQIGPITLAGPVILAPMSGVSDLPFRRLVKRAGCGLVVSEMIASQAMIREN-RQTLRMVE 61

Query: 61  VD-EPGIRTVQIAGSVPEEMADAARINVESGAQIIDINMGCPAKKVNRKLAGSALLQYPD 119
            + E     VQ+AG  PE MA+AA++N + GA ++DIN GCP KKV    AGS+L++   
Sbjct: 62  TEPEEFPMAVQLAGCEPEVMAEAAKLNEDRGAAVVDINFGCPVKKVVNGHAGSSLMRDEA 121

Query: 120 QVKAILTAVVSAVDVPVTLKIRTGWSPVHRNCVEIAQLAEDCGIQALTIHGRTRACLFNG 179
               IL AVV AV +PVTLK+R GW   +RN   +A++AE CGI+ +T+HGRTR   + G
Sbjct: 122 LAGRILEAVVKAVSIPVTLKMRLGWDETNRNAPNLARIAEQCGIRMVTVHGRTRMQFYTG 181

Query: 180 EAEYDSIRAVKQKVSIPIIANGDITDPLKARAVLDYTGADALMIGRAAQGRPWIFREIQH 239
            A++  +R VK+ V IPI+ NGDI         L  +GAD +MIGR + GRPW   ++  
Sbjct: 182 TADWTYVRHVKEAVKIPIVVNGDIASFEAVDRALAESGADGVMIGRGSYGRPWFPSQVMQ 241

Query: 240 YLDTGELLAPLPLAEVKRLLCSHVRELHDHYGQAKGYRIARKHVSWYLQEHAPDDQFRRT 299
           YL TGE L   P+ E    L  H   +  HYG   G ++ARKHVSWY       ++FR+ 
Sbjct: 242 YLRTGETLPDPPVPEQMDTLLEHFDSMLSHYGTDGGIKVARKHVSWYSTGLRGSNEFRQE 301

Query: 300 FNAIEDASVQLEALEAYFE 318
            N + D +   + + A++E
Sbjct: 302 VNQLGDPNAVRDRIRAFYE 320