Pairwise Alignments

Query, 631 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 629 a.a., DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 1118 bits (2891), Expect = 0.0
 Identities = 579/636 (91%), Positives = 601/636 (94%), Gaps = 19/636 (2%)

Query: 1   MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF 60
           MAEFETTFADLGLKAPILEAL DLGYEKPSPIQAECIPHLL GRDVLGMAQTGSGKTAAF
Sbjct: 1   MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF 60

Query: 61  SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR 120
           SLPLLNN+DP+L+APQILVLAPTRELAVQVAEAMT+FSKHMRGVNVVALYGGQRYDVQLR
Sbjct: 61  SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR 120

Query: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG 180
           ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIP+G
Sbjct: 121 ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG 180

Query: 181 HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL 240
           HQTALFSATMPEAIRRIT+RFMK+PQEVRIQSSVTTRPDISQSYW+V+GMRKNEALVRFL
Sbjct: 181 HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL 240

Query: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300
           EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
Sbjct: 241 EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI 300

Query: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360
           ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
Sbjct: 301 ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360

Query: 361 ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD 420
           ERTMKLTIPE +LPNA+LLGKRRLEKFAAKVQQQLESSDLDQYRALL++IQP AEGEELD
Sbjct: 361 ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD 420

Query: 421 METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPER 480
           +ETLAAALLKMAQGER LI+PPDAPMRPKREFRDRDDR  R     DRNDRGPRGDR   
Sbjct: 421 LETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPR-----DRNDRGPRGDR--- 472

Query: 481 GGEDRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST 540
             E+RPRRERRD GDM+LYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST
Sbjct: 473 --EERPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHST 530

Query: 541 IELPKGMPGEVLQHFTRTRILNKPMNMQLMGDAQPRPDRGGERRGGGRSFGGERREGGRS 600
           IELPKGMPGEVLQHFTRTRILNKPMNMQL+GDA P    GGERRGGGRSF GERREGGR+
Sbjct: 531 IELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAVPH--AGGERRGGGRSFSGERREGGRN 588

Query: 601 -------EGRGEPRRFSGERRENRGPRRDEGTSRRR 629
                   GRG+ RRFSGERRE+RGPRRD+ T RRR
Sbjct: 589 FSGERREGGRGDGRRFSGERRESRGPRRDDSTGRRR 624