Pairwise Alignments

Query, 422 a.a., outer membrane porin, OprD family from Enterobacter asburiae PDN3

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 1e-59
 Identities = 136/399 (34%), Positives = 204/399 (51%), Gaps = 28/399 (7%)

Query: 29  FIDDSHLDLFLRNAYISRDYHQGQQDKA---EWGQGIIATFASGYTEGLVGFGLDGIAQY 85
           FI DSH  L LRN YI+RD+ Q    +A   EWGQG  A   SG+TEG VGFG+D + Q 
Sbjct: 32  FIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGPVGFGVDALGQL 91

Query: 86  GVRLDGGRGKSGAGGIDFFKQEDDGRAKSDLAKFGATAKMRISNTVLSYGNQRPELPIIN 145
           G++LD  R +   G + F     +     D ++ G T K+R+S + L  G  +P LP++ 
Sbjct: 92  GIKLDSSRDRRNTGLLPFGPNSHE--PVDDYSELGLTGKVRVSKSTLRLGTLQPILPVVV 149

Query: 146 ADSSRLLFESYTGTMLTSKEIDGLEVNAGYFTDEQ-RKSDDRHDSGLKS-----LSFGGA 199
            + +RLL  S+ G +LTS+++DGL  NAG  T    R S  R D G  +     L FGG 
Sbjct: 150 YNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGYGAASSDHLDFGGG 209

Query: 200 SYQFNDQFSGALYASHNEEVMNKQYLGMNFKQPFSTGQQLVLDFNGYNSRLDQSY-ADSL 258
           SY    Q + + Y +  +++  +Q++G+   +P + G  L  D   ++SR D +  A ++
Sbjct: 210 SYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYFDSRNDGAERAGNI 269

Query: 259 DTGRSNTIWSLAASYIWDIHTFKVAYQQSSGSTGYNYGGYRDKGGVGDGGNTIWLANSYW 318
           D    N +++L        H F   +QQ SG + + +          +GG+   +    +
Sbjct: 270 DNRNFNAMFTLGVR----AHKFTATWQQMSGDSAFPFV---------NGGDPFTVNLVTY 316

Query: 319 SDFNGEDERSWQASYGLDFAGLGLPGLSWTTAYVRGDNIKTSETSNGKEHEWFNQIQYQV 378
           + F      SWQ  Y  DF  +G+PGLS+ T Y  G + +T+  +NG+E E    I Y +
Sbjct: 317 NTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDITYVI 376

Query: 379 QDGPAKDLKLKLRYSVLRVSGNASEYNVGGDEIRAYVEY 417
           Q GP KD+ L+ R    R SGN     V  DE R  + Y
Sbjct: 377 QSGPFKDVSLRWRNVTFR-SGNGLTNAV--DENRLIIGY 412