Pairwise Alignments

Query, 422 a.a., outer membrane porin, OprD family from Enterobacter asburiae PDN3

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  219 bits (558), Expect = 1e-61
 Identities = 150/452 (33%), Positives = 218/452 (48%), Gaps = 53/452 (11%)

Query: 9   ALSLFAALPAAASQQSDSQGFIDDSHLDLFLRNAYISRDYHQG-----------QQDKAE 57
           ALSL   L + A   SD +GFID + + +  RN + S+DY  G           Q    E
Sbjct: 10  ALSLAILLASPAFADSDDEGFIDGTRVHVLNRNFFFSQDYRNGDFTLNPNNGERQSLHRE 69

Query: 58  WGQGIIATFASGYTEGLVGFGLDGIAQYGVRLDGGRGKSGAG-GIDFFKQED----DGRA 112
           WG GIIA   SG+T G VGFG+D     G++LDGG G  G G G+           DG  
Sbjct: 70  WGHGIIANLQSGFTRGTVGFGVDVQGLVGLKLDGGNGAVGNGVGVPGIVSRSGSNFDGEP 129

Query: 113 KSDLAKFGATAKMRISNTVLSYGNQRPELPIINADSSRLLFESYTGTMLTSKEIDGLEVN 172
           K    K G   K+R  +T L YG+  P  P+++A   RLL ++  G +  +  +DGL + 
Sbjct: 130 KDSYGKVGTALKVRAFDTELRYGDVSPTSPVLHASDIRLLPQTLRGFIFNNNSLDGLSLQ 189

Query: 173 AGYFTDEQRKSDDRHDSGLKSLSFG-----------GASYQFNDQFSGALYASHNEEVMN 221
            G       ++   H   L ++  G           G  Y+FNDQ +  L++S  ++V N
Sbjct: 190 GGKLESSSDRNASNHRGDLGTVYAGRIKGANDVVYLGGDYRFNDQLTLRLHSSRLDDVWN 249

Query: 222 KQYLGMNFKQPFSTGQQLVLDFNGYNSR-LDQSYADSLDTGRSNTIWSLAASYIWDIHTF 280
           + +  ++  QP  +   L    N Y +R   Q+ A  +D    N  WS+ A      H F
Sbjct: 250 QSFFSVDHVQPLGSELSLKTGLNYYRTRDSGQALAGQID----NDSWSVHAGLAAGAHGF 305

Query: 281 KVAYQQSSGSTGYNYGGYRDKGGVGDGGNTIWLANSYWSDFNGEDERSWQASYGLDFAGL 340
           K++Y +  G T ++Y        V +  +    A S  SDFN  +ER+W+A Y  DFA L
Sbjct: 306 KLSYTRIDGDTPFDY--------VWNTYDLQLDAASQVSDFNNPNERAWEARYDYDFAPL 357

Query: 341 GLPGLSWTTAYVRGDNIKTSE----------TSNGKEHEWFNQIQYQVQDGPAKDLKLKL 390
           G+PGLS T  YVRG +I  +           T +G+  E    ++Y +Q GPAKDL   L
Sbjct: 358 GVPGLSLTARYVRGTDIDGTRAGGAYSYFNGTEDGRHWERNLWLKYVLQSGPAKDLSFNL 417

Query: 391 RYSVLRVSG-NASEYNVGGDEIRAYVEYPFNV 421
             +  RV G + +E NV  DE+R  V+YP ++
Sbjct: 418 MQATHRVGGDHVAESNV--DELRLIVQYPLDI 447